Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2612 ATGACTATCGCCGGCGATGTTTTCAGGCTCAATTTGCCTCAAGTTCTCGATGATTCGCCTTCCTGTTCTCAGGAATTCCACGTTCTCGCCGTCGATGACAGTCATGTCGACCGCAAGGTCATTGAACGCTTGCTCAAAATTTCTTCCTGCAAAGTGACGGTTGTGGAGAGTGGAACCAGAGCTTTACAATATTTGGGATTGGACGGAGAGGAGAACTCCATTGGGTTTAATAGTACAAAGGTTAATCTAATCATGACGGACTATTCCATGCCGGGGATGACAGGATATGAACTTCTCAAGAAGATCAAGCAGGAGTCATCTATGTTTAGAGAGATTCCAGTGGTGATCATGTCTTCTGAGAACATTTTGACACGAATTGATAGGTGTTTGGAGGAAGGAGCAGAGGAATTTCTATTGAAACCAGTGAAGTTATCAGATGTTAAACGATTGACTGATTTCATCATGAGAGGTGAAACGAAGGGAAAGGAAAAGAGATCTCACAAAAGAAGGCGATCTGATGATCAAAGTTCATCTCCATCTACACTGCCCTTATCCAAGTCTCATCCATCATTGTCACCATCTTCCTTGTCCTCCAAGAGATCTAGATTACTAGCAGATTTTGACTAG 627 0.4306 MTIAGDVFRLNLPQVLDDSPSCSQEFHVLAVDDSHVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGEENSIGFNSTKVNLIMTDYSMPGMTGYELLKKIKQESSMFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLSDVKRLTDFIMRGETKGKEKRSHKRRRSDDQSSSPSTLPLSKSHPSLSPSSLSSKRSRLLADFD 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2612 208 Gene3D - 27 204 - -
Alju06g2612 208 MobiDBLite consensus disorder prediction 176 201 - -
Alju06g2612 208 SMART REC_2 26 151 IPR001789 GO:0000160
Alju06g2612 208 CDD REC_typeA_ARR 28 150 - -
Alju06g2612 208 ProSiteProfiles Response regulatory domain profile. 27 155 IPR001789 GO:0000160
Alju06g2612 208 SUPERFAMILY CheY-like 25 157 IPR011006 -
Alju06g2612 208 Pfam Response regulator receiver domain 28 148 IPR001789 GO:0000160
Alju06g2612 208 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 177 IPR045279 GO:0009736
Alju06g2612 208 MobiDBLite consensus disorder prediction 158 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2612 Alju-ChrAlju06 53152641 53154172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2612 13 169 Response Regulator Gene Family AT3G48100 72.393 1.16e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Alju06g2612 Response_reg 1.4e-21 CL0304