Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2608 ATGACGATCACTGTTCCCAGTCGGCAGCTGTTCCTAGATGGCGAGTGGAAAGAGCCGATCCTCAAGAAACGAATTCCTATCATCAATCCCTCCACCGAACTCATAATTGGAGAAATTCCAGCTGCTACTGCGGAGGATGTGGACCTTGCAGTGGCTGCTGCTCGGAGAGCCCTGGTCAGGGACAAGGGTAAACACTGGGCAACAGCTTCTGGTTCTGTTCGTGCTCGGTATTTGCGAGCCATCGCTGCTAAGGTAATGGAAAGGAAGTCTGAACTAGCAAAACTTGAAGCAATTGATTGCGGAAAACCACTGGATGAAGCATTGTGGGACATGGATGATGTTGCTGGTTGCTTCGAGTACTATGCTGACCTTGCTGACGGATTGGATGCAAAGCAAAAAGCTGCCATATCTCTTCCCATGCAAACCTTCAAGAGTCATGTTCTTAGGGAGCCCATTGGAGTTGTTGCATTGATTACTCCATGGAACTATCCTCTATTAATGGCTGTGTGGAAAGTGGCTCCTGCCTTGGCTGCTGGTTGTACTGCAATTTTGAAGCCATCTGAATTGGCATCTGTGACCTGTTTGGAGCTGGGTCAGATATGTAGAGATGTGGGCCTTCCTCCAGGTGTCTTAAATGTTCTAACTGGTTTAGGTCCTGAAGCTGGTGCTCCTTTGGCATCGCATCCTCATGTGGACAAGATTGCGTTTACTGGAAGCTCTATGACTGGAAGCAAGATTATGTCAACTGCAGCTCAACTGATCAAGCCTGTTTCACTAGAGCTTGGTGGTAAAAGCCCGATTGTTGTTTTTGAGGATGTTGACCTTGATAAAGCTGTTGAATGGACGATGTTTGGCTGTTTCTGGACAAATGGTCAGATTTGTGCTGCAACTACCCGTCTTATCATACATGAAAGCATAGCTGAACAATTTTTGAATAGGCTTGTGAAATGGATTAAAAACATCAAGATATCAGATCCCTTGGAAGAAGGTTGCAGGCTTGGTCCAGTTGTTAGTAAAGGACAGTACGAGAAAGTATTGAAGTTCATCTCAACTGCTAAGAGTGAGGGGGCAACAATTCTGACTGGTGGATCTCGCCCTAGGCATTTAAACAAGGGTTTCTTTATTGAACCAACTGTCGTTACTGATGTAACTACCTCTATGCAAATTTGGAGAGAAGAAGTTTTTGGACCTGTTCTCTGTGTAAAAACATTTAGTACTGAGGAAGAAGCTATTGAACTAGCAAATGACACCCAATATGGCTTAGCTGCTGCTGTGATATCAGATGATCTAGAAAGATGTGAACGCTTAACTAAGGCTTTTCAGGTGGGAATTGTATGGATCAACTGCTCTCAGCCGTGTTTCACTCAAGCCCCGTGGGGAGGCATTAAACGTAGTGGTTTTGGTCGTGAATTGGGAGAATGGGGGCTTGAAAACTACTTGAGTGTAAAGCAAGTGACTCGATATATATCAGATGAACCTTGGGGTTGGTACCAGTTTCCTTCAAAGCTGACGAATCTGAGTCTTCAAAGGTCAGGCATGTGCTCTCTGATATATTTTTACCTCTTGACATTTACGGCAGTGCCAAAATATAATGAGCTTTCTCTCTTTTACAAGAAGCTGAGCCTTACCTCGCATTGTAACGGACAGTTTGGGGCTTGA 1659 0.4485 MTITVPSRQLFLDGEWKEPILKKRIPIINPSTELIIGEIPAATAEDVDLAVAAARRALVRDKGKHWATASGSVRARYLRAIAAKVMERKSELAKLEAIDCGKPLDEALWDMDDVAGCFEYYADLADGLDAKQKAAISLPMQTFKSHVLREPIGVVALITPWNYPLLMAVWKVAPALAAGCTAILKPSELASVTCLELGQICRDVGLPPGVLNVLTGLGPEAGAPLASHPHVDKIAFTGSSMTGSKIMSTAAQLIKPVSLELGGKSPIVVFEDVDLDKAVEWTMFGCFWTNGQICAATTRLIIHESIAEQFLNRLVKWIKNIKISDPLEEGCRLGPVVSKGQYEKVLKFISTAKSEGATILTGGSRPRHLNKGFFIEPTVVTDVTTSMQIWREEVFGPVLCVKTFSTEEEAIELANDTQYGLAAAVISDDLERCERLTKAFQVGIVWINCSQPCFTQAPWGGIKRSGFGRELGEWGLENYLSVKQVTRYISDEPWGWYQFPSKLTNLSLQRSGMCSLIYFYLLTFTAVPKYNELSLFYKKLSLTSHCNGQFGA 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2608 552 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491
Alju06g2608 552 FunFam Betaine aldehyde dehydrogenase 263 454 - -
Alju06g2608 552 SUPERFAMILY ALDH-like 4 490 IPR016161 GO:0016491
Alju06g2608 552 CDD ALDH_F10_BADH 27 487 - -
Alju06g2608 552 Pfam Aldehyde dehydrogenase family 23 485 IPR015590 GO:0016491
Alju06g2608 552 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620
Alju06g2608 552 PANTHER ALDEHYDE DEHYDROGENASE 5 509 - -
Alju06g2608 552 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 483 IPR016162 GO:0016491
Alju06g2608 552 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491
Alju06g2608 552 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 12 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2608 Alju-ChrAlju06 53114530 53123623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2608 1 503 Aldehyde Dehydrogenase Gene Family AT3G48170 79.125 0.0 869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2608 06 53114530 53123623 Alju13g1536 13 33644509 33648503 CCT
Alju06g2608 06 53114530 53123623 Alju06g2608 06 53114530 53123623 ECH