Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2588 ATGCATGGGCGTGGAGGTGAGGAGAGGAAAAGAACTCGGCACATGTGGACAAGCCCCACTCGTGGCCAACCGATTGTAAGCGCTGTTCCCGATGTTTCTTTTTCATCTTCGCCTACAGCTAATTCATTCTATAAGGACGGTCGTAAAATTAATATTGGTGACTGTGCTCTCTTCAAGCCACCGCAGAAGTCACCCCCTTTTATTGGAATAATTCGATCGCTGACAGTTGTTAAAGAGGGTAAATTGAAGATACTTGTTAATTGGCTTTATCGGTCTGCTGAAGTGAACCTTGGCAAAGGACTCCTGCTGGAGACTGCGCCAAACGAAGTTTTCTACTCCTTTCATAAGGATGAGATTCCTGCTGCATCCCTTTTGCATCCTTGTAAAGTTGCATTTCTTCCCAAGGGCGCCGAACTTCCATCAGGGACTTCGTCATTTGTGTGCAGGAGGGTTTATGACATTGCAAACAAGTGTTTATGGTGGTTAACTGACCAAGATTATATTAATGTACTTCAAGAAGAAGTAGATCAACTATTGTATAGGACTCGTATAGAAATGCATGCTACAGTGCAACCGGGTGGTCGATCTCCAAAGCCAATGAGTAGTCCAACATCATCACAGTTAAAATCAGGTTCAGATAGTGTCCAGAATAGTGCTTCTTCTTTTCCTTCTCAAGTTAAGGGCAGGAAAAGGGAGAGGGTAGATCAAGGGCCTGAATCTGCCAAGAGAGAACGAACAACAAAAGTTGAGGATGGAGACTCTGGTCATTCTAGACAGGAGAACATTTTAAAGACAGAGCTTGCAAAAATTACAGAAAAGGGGGGGCTTGTCAATGCTGAAGGGGTTGAGAAGCTTGTGCAGCTTATGCATCCTGATAGGAATGTAAAAAAGATAGATTTGGCTAGCCGGGCAATGCTTGCTGCTGTTATTGCAGCGACAGATAAATTGGATTGTCTCAGTCAGTTTGTGCAGCTGAAGGGTTTGCCGGTGTATGATGAATGGCTTCAAGAGGTTCATAAAGGGAAGATTGGTGATGGAAGTGGGTCTAAGGACAGTGATAAATCTGTTGAAGAATTTCTTTTGGTATTACTTCGGGCACTTGATAAGCTTCCTGTAAATCTTCAAGCTCTACAGACATGTAACATTGGTAAATCTGTGAATCATTTGCGAACTCATAAAAACTCAGAAATCCAGAGGAAAGCTAGGGGTTTAGTTGACACATGGAAGAAACGTGTTGAAGCTGAAATGAATATCAATGATGCAAAGGCTGGTTCTGGTCAAACTGTCCCCTGGCCTACTAGGACACGCCTCTCTGAAGTTGGCCAGGGTGGGAATAAAAATTCAGGTGGATCATCTGATGTTGCTGTTAAGAGCACGGTTACACAGCTCTCTGCATCCAGAACTTCCTCTGTGAAGATTACCCAGGGAGAGAATGCTGCCAGATCTGCATCCCCTGGGTCTATGAAGTCAGTCCCCTCACCAACCTCAGCAACTATAAATTCAAAAGACGGACAGCCCCGTGCTGCCACTTTTAGTGGAGTTTCTGATATCCCCATATCAAATGCAAGGGATGAGAAAAGTAGTAGTTCTAGTCAATCTCATAATAACAGTCAGTCTTGTTCCAGTGACCATGCTAAAACTGGGGGGTTTTCTGGAAAGGAGGATGCTAGGAGCTCTACCGCCATGAGTGTGAATAAAATATCAGGCAGTTCATCTCGGCACCGAAAGTCTGTTAATGGAATCTCAGGTGCAACTCCATCTGGAGGGCAAAGGGAGTCTGTTCGAAATTCCTCTGTACACAAAAATTCATCTTCTGAAAAATTGTCTCAATCTGGATTAACAGAAAAGGTGCATGATGGGACCTCTCTTGAGGGAAGTACTCCCAAGCTGATTGTTAAGATTCCAAACCGAGGTCGGAGTCCTGCAGAAAGTGCAAGTGGAGGTTCTTTTGATGATCCTTCAATCATGAACAGTCGAGCATCATCTCCTGTTTTTTCAGAGAAGAATGAGCATTATGATCATAGCTTAAAGGAAAAGATTGATTTTTATCGAGCTAATACTGGTGCAGATATTAATACTGAATCCTGGCAGAGTAATGATTTTAAAGATGTACTGACAGCATCTGATGAAGGCAATGGATCACCTGCTGCTGTTACTGATGAAGAGCGCTGCAGGACTGTCAGTGATTCTAAGAAGATGATGGAAGCATCAAAAGCTGCTTCTTCATCATCTGGAAATGAAAATAAGGCAGTAAATACTCAGGATGCTTCTTTCAGCTCCATAAATGCTTTGATAGATAGTTGTGTAAAGTATTCAGAAACTAATGCTTCTTTGTCTGCGGTTGATGATGTTGGAATGAAGCTTCTTGCCAGTGTAGCGGCTGGTGAGATTTGCAAATCTGAATTGACAACCCCTGCTGGATCACCTGAAATAAACACCAATGTGGTTGAACAGTCATGTCCAGGTAATGCCATGGAGTGTGAAGGAAAGCTGGTTCAAAATGAATGTCATGCAAGTACTGGCATTGATGAACATAAGAAGCAAGATATGGTATCTGGTGATTCACGTGCTATTAGTGATAATGATTTGGGTCTTTTGGCATCTGAAGGGAAGGTTCCTGAAGAGCAAAATAGGCATATTACTTCATCTAGTATGGTTTTGCAGCGGGTTACAGCAGCCTGTCCAGAAAGCAAAGAAAAATCAAGTGAAATTCCAGTTGCTGCTGCATTATCTGGCCTTCCGGAAAGCGCAGTGCAAGAAGCCAGAGGTAGTGAATGTAGCAAACAGCTCAAGGAAAACAAAACTGTTGGGAATGTTAATGCAGGTGGAGAGCTTGATGTTAAAGCTAATGAGGTTGCAAGAGAAGTTGAGATGGACAATATTGACAAATCGACACCACATCCCTCTGTGGAGGTTGATCTGAAGGGTGAAAGTTGTACGATTGAGGAATTAAGAAGGTGTGGACAGACTGCTCAGAATCAGAAGGTTCCTTTGGTTGTTATGCAGGATTCAGTGAAAGGAACTGAGGGGAATGTGCTACATCCTTCTGATGACTGTGTTGGTAAGGCTGTAGAAGACCACAGTGATGGAGAATGCAGAAAGACTGTTGATGTGGCTGATCGAAGTCATGCAGGTCAGTCTGAAATCCAAAGAAATGAGTTTGAAAGTGATGCTGTGACAACGCCTGAGAACAGAAGTACAACAGGTTTAGGTTCAGGTGACACTGGTCTTGCTTCTGAGCACGTGGAGGAGAATTCAGAAACAAGAGAGTCTCATGACCAACATGCTGGACAGAATCTGCAGAGAGCTTCACTGAGCTTGCCTTCACAAGAAATGGAGCCGCGTCCAGGCTCTAAAGAATCTAAATTGACTGCCATTGAAACAGAGGAAGCTGAAGAGTGCACCTCTGCCACTGCAGATGCCTCTTCCATGTCTGACGCTGGTGTGTCTGATGTGGCAGATGCAAAAGTTGGGTTTGATTTAAATGAAGGCTTCAGTGCAGATGATGGAAAATCTGGAGAGTTCAATAGCACTCCTGTGCCTGGTTGTGCACCTGCTGTACGAGTGATCAGTCCAGTGCCATTTCCTGCTTCAACCATGTCTAGTGGTATTACTGCCTCAATCACTGTTGCTGCAGCTGCAAAGGGGGCCTTTGTGCCACCTGAAGACTTGTTGAAAAGTAAAGGGGGGGAGCTTGGTTGGAGGGGATCAGCTGCCACCAGTGCATTCCGGCCTGCTGAGCCCAGAAAAATTGTAGAAATACCTCTTGGTACACCATCAGCAGCTCCTATATCTGATGCCACAGCTGGAAAGCAGAGTCGGCAATTATTAGATATTGACTTGAATGTGCCTGATGAAAGGATGCTTGATGATATAGCCTCTCAAGCTAGTTCTCGTCAGCCAGCAGATGGTGTTTCCTCTGTTCGCTTCTCTCTTGACTTAAACCAAGTAGATGAAGCTTCTGATGTCGGAAATTGTTCCACAAGCAATGGTCATAAAATGGATGTACAATTTCTGCAGGTGAAACAATCATCCAATGCTCATCCAAATAGAGAGGCAAGTGCCCTTAGGAACTTTGATTTGAATGACGGGCCTGCTGCTGATGAAGTCATCATGGAGCCAACATTGTTCACTCACCAATCCAGAAGCAATGTATCATCCCAGGCCCCCGCATCTGGACCTAGAACGAGTAGTACTGAACTGGGGAGTTTCTCATCATGGTTTCCTTCAACTGGGAACACTTATTCAGCTGTCACAATATCTTCAGTTATGCCTGATAGAGGGGATCAGCCCTTTTCAATTGTTGCACCTAATGGGCCGCAAAGAATACTGGTTCCTGCTACTGGTGGTAGCCCATTTGGACCTGATGTTTATAGGGGACCAGTGCTGCCATCTTCTGCAATGCCATATCCATCTGTGCCATATCAGTATCCTGTCTTCCCTTTTAATTCCAGCTTTCCTCTTCCATCATCATCATTTTCAGGTGGATCAACTACCTATGTAGATTCAGCATCTGGGGGAAGACTTTTCTTTCCCACAGTAAATTCACAGTTAATTGGACCTGCCAGTACTGTTTCATCTCATTACACCGCCAGGCCTTATGTCTTTAGTCTTCCTGATGGTAGTGGTACTGCTGATGGTAAGAAATGGAGAGGGCAGGGTTTAGACCTTAATGCTGGGCCTGGAGGTCCTGAAGTGGAGGGCAGAGATGAGAGCTCAGCTCTGTTGCCAAGGCAACTTCCTGTTGCCAGTTCACAGGCCCTAGCTGAGGAGCAGGTGAGGATGTTCCAGCTGGCTGGTGGTGTTCTCAAGAGGAAGGAACCAGATGGTGGATGGGATAGCTACAAGCAATCCTCTTGGCAATAG 4866 0.447 MHGRGGEERKRTRHMWTSPTRGQPIVSAVPDVSFSSSPTANSFYKDGRKINIGDCALFKPPQKSPPFIGIIRSLTVVKEGKLKILVNWLYRSAEVNLGKGLLLETAPNEVFYSFHKDEIPAASLLHPCKVAFLPKGAELPSGTSSFVCRRVYDIANKCLWWLTDQDYINVLQEEVDQLLYRTRIEMHATVQPGGRSPKPMSSPTSSQLKSGSDSVQNSASSFPSQVKGRKRERVDQGPESAKRERTTKVEDGDSGHSRQENILKTELAKITEKGGLVNAEGVEKLVQLMHPDRNVKKIDLASRAMLAAVIAATDKLDCLSQFVQLKGLPVYDEWLQEVHKGKIGDGSGSKDSDKSVEEFLLVLLRALDKLPVNLQALQTCNIGKSVNHLRTHKNSEIQRKARGLVDTWKKRVEAEMNINDAKAGSGQTVPWPTRTRLSEVGQGGNKNSGGSSDVAVKSTVTQLSASRTSSVKITQGENAARSASPGSMKSVPSPTSATINSKDGQPRAATFSGVSDIPISNARDEKSSSSSQSHNNSQSCSSDHAKTGGFSGKEDARSSTAMSVNKISGSSSRHRKSVNGISGATPSGGQRESVRNSSVHKNSSSEKLSQSGLTEKVHDGTSLEGSTPKLIVKIPNRGRSPAESASGGSFDDPSIMNSRASSPVFSEKNEHYDHSLKEKIDFYRANTGADINTESWQSNDFKDVLTASDEGNGSPAAVTDEERCRTVSDSKKMMEASKAASSSSGNENKAVNTQDASFSSINALIDSCVKYSETNASLSAVDDVGMKLLASVAAGEICKSELTTPAGSPEINTNVVEQSCPGNAMECEGKLVQNECHASTGIDEHKKQDMVSGDSRAISDNDLGLLASEGKVPEEQNRHITSSSMVLQRVTAACPESKEKSSEIPVAAALSGLPESAVQEARGSECSKQLKENKTVGNVNAGGELDVKANEVAREVEMDNIDKSTPHPSVEVDLKGESCTIEELRRCGQTAQNQKVPLVVMQDSVKGTEGNVLHPSDDCVGKAVEDHSDGECRKTVDVADRSHAGQSEIQRNEFESDAVTTPENRSTTGLGSGDTGLASEHVEENSETRESHDQHAGQNLQRASLSLPSQEMEPRPGSKESKLTAIETEEAEECTSATADASSMSDAGVSDVADAKVGFDLNEGFSADDGKSGEFNSTPVPGCAPAVRVISPVPFPASTMSSGITASITVAAAAKGAFVPPEDLLKSKGGELGWRGSAATSAFRPAEPRKIVEIPLGTPSAAPISDATAGKQSRQLLDIDLNVPDERMLDDIASQASSRQPADGVSSVRFSLDLNQVDEASDVGNCSTSNGHKMDVQFLQVKQSSNAHPNREASALRNFDLNDGPAADEVIMEPTLFTHQSRSNVSSQAPASGPRTSSTELGSFSSWFPSTGNTYSAVTISSVMPDRGDQPFSIVAPNGPQRILVPATGGSPFGPDVYRGPVLPSSAMPYPSVPYQYPVFPFNSSFPLPSSSFSGGSTTYVDSASGGRLFFPTVNSQLIGPASTVSSHYTARPYVFSLPDGSGTADGKKWRGQGLDLNAGPGGPEVEGRDESSALLPRQLPVASSQALAEEQVRMFQLAGGVLKRKEPDGGWDSYKQSSWQ 1621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2588 1621 SMART BAH_4 48 163 IPR001025 GO:0003682
Alju06g2588 1621 MobiDBLite consensus disorder prediction 1 15 - -
Alju06g2588 1621 MobiDBLite consensus disorder prediction 650 665 - -
Alju06g2588 1621 MobiDBLite consensus disorder prediction 1 20 - -
Alju06g2588 1621 MobiDBLite consensus disorder prediction 418 670 - -
Alju06g2588 1621 MobiDBLite consensus disorder prediction 226 262 - -
Alju06g2588 1621 MobiDBLite consensus disorder prediction 1379 1400 - -
Alju06g2588 1621 MobiDBLite consensus disorder prediction 195 225 - -
Alju06g2588 1621 Gene3D - 35 278 IPR043151 -
Alju06g2588 1621 MobiDBLite consensus disorder prediction 1080 1096 - -
Alju06g2588 1621 MobiDBLite consensus disorder prediction 1040 1147 - -
Alju06g2588 1621 CDD TFIIS_I 337 413 - -
Alju06g2588 1621 Pfam BAH domain 50 156 IPR001025 GO:0003682
Alju06g2588 1621 MobiDBLite consensus disorder prediction 553 621 - -
Alju06g2588 1621 ProSiteProfiles TFIIS N-terminal domain profile. 336 415 IPR017923 -
Alju06g2588 1621 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1621 - -
Alju06g2588 1621 MobiDBLite consensus disorder prediction 1115 1129 - -
Alju06g2588 1621 MobiDBLite consensus disorder prediction 706 752 - -
Alju06g2588 1621 MobiDBLite consensus disorder prediction 189 262 - -
Alju06g2588 1621 MobiDBLite consensus disorder prediction 735 752 - -
Alju06g2588 1621 MobiDBLite consensus disorder prediction 1542 1573 - -
Alju06g2588 1621 MobiDBLite consensus disorder prediction 421 546 - -
Alju06g2588 1621 MobiDBLite consensus disorder prediction 1051 1074 - -
Alju06g2588 1621 ProSiteProfiles BAH domain profile. 48 163 IPR001025 GO:0003682
Alju06g2588 1621 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 279 416 IPR035441 -
Alju06g2588 1621 SMART TFS2_5 335 414 IPR003617 GO:0005634
Alju06g2588 1621 Pfam TFIIS helical bundle-like domain 363 412 IPR017923 -
Alju06g2588 1621 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 317 426 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2588 Alju-ChrAlju06 52908401 52914545 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Alju06g2588 BAH 2.2e-08 No_clan