Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2581 ATGGCCAGTGTTCCACATAAGACTCAGCAAATAGGTGATAGCTTGAGGTATTCACCTCCTGAATCGCCTCTCTCTTCATTGCAAGCTCCTTATTACATAGCTATAAATGAGAAAGAAGAACCATCTCCTTCTTCAACTGTAAGCAAAATCAGCCCACTTATTCTGTTAGTAATAGTTGTTCTGGCAGTCATCTTCTTCATCTATGGAATCATTCATTTGGTTCTTTGGCTTCTAATGAGAACTCCACCATCATCTTCACCTCTATATCATTCCAATAGATTTCCAGAATCCGCACGCTCTCGTGCTTTTCAAAGGCAGCTTCATCATCTCTTTCGCCTACATGATTCAGGATTAGAACAGTCTCTCATAGATGCTCTTCCTGTTTTTTACTACGAGGATGTCTTGGGTTTGAAAGAACCATTTGATTGTGCTGTGTGTCTCTGTGAATTCTCTGAGCAGGACAAGCTGAGGTTGTTGCCAATGTGTGGCCATGCTTTTCACATCAGTTGTCTTGACACTTGGCTCCTCTCAAACTCTACATGCCCTCTTTGCAGAGCGACAATCTCTTCAAGTTCAGATTTTTCTGCGGAAAATCCATTGTTCAATAATGATAATTCATGGGTTTTTAACAGATTCAAAGGAGATGAAGAGAATGCCAATGGGTGTTCAGATACTGAGAAAGTTCTGGGTAATGAAGATCGAATTACAGAAGAAAGGGTTTTTTCTGTGAGGCTTGGAAAGTTCAGAAACATTGATGGAGGAGAAGTAGAGGTTGGAGGAGAAGAAGGAGGTAGCAGTTGTAATATGGATGGAAGGAGATGCTTCTCCATGGGATCTTATCAATATGTGCTGAGTGGTTCAAATCTGCAAGTGGTTCTTTCTGATGTTTCAGACAATGAGGAAGCTGTGGAGGGGAAGAAGATTGGAGATAGAATCAGAGGTGAGAGCTTCTCTGTGTCAAAGATATGGCTTTGGTCTAACAAGAGCAAGTTTCGAAGTTCTTCTGATGCTGCTGGTTTCCCTTGGTTACTGTAA 1035 0.4145 MASVPHKTQQIGDSLRYSPPESPLSSLQAPYYIAINEKEEPSPSSTVSKISPLILLVIVVLAVIFFIYGIIHLVLWLLMRTPPSSSPLYHSNRFPESARSRAFQRQLHHLFRLHDSGLEQSLIDALPVFYYEDVLGLKEPFDCAVCLCEFSEQDKLRLLPMCGHAFHISCLDTWLLSNSTCPLCRATISSSSDFSAENPLFNNDNSWVFNRFKGDEENANGCSDTEKVLGNEDRITEERVFSVRLGKFRNIDGGEVEVGGEEGGSSCNMDGRRCFSMGSYQYVLSGSNLQVVLSDVSDNEEAVEGKKIGDRIRGESFSVSKIWLWSNKSKFRSSSDAAGFPWLL 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2581 344 CDD RING-H2_EL5-like 142 185 - -
Alju06g2581 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 194 IPR013083 -
Alju06g2581 344 SMART ring_2 143 184 IPR001841 -
Alju06g2581 344 FunFam E3 ubiquitin-protein ligase ATL6 106 191 - -
Alju06g2581 344 SUPERFAMILY RING/U-box 122 191 - -
Alju06g2581 344 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 46 323 - -
Alju06g2581 344 ProSiteProfiles Zinc finger RING-type profile. 143 185 IPR001841 -
Alju06g2581 344 MobiDBLite consensus disorder prediction 1 24 - -
Alju06g2581 344 Pfam Ring finger domain 142 185 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2581 Alju-ChrAlju06 52862125 52863159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2581 38 335 C3H Transcription Factor Family AT2G18650 38.938 1.57e-55 185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2581 06 52862125 52863159 Alju06g2581 06 52862125 52863159 ECH