Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2565 ATGACGAAAACAAGTAATGAGTCGTCCTCAAAAGTGGATCGCAAAACCATAGAAAGGAATCGCAGAATTCACATGAAAGCTCTTTGCTTCAAGCTCGCTTCTCTTATCCCTCCCCACTACTTAAAACACACCAAGGACATGATATCGCAGCAAGATCAGCTGGATATAGCAGCGAGCTACATAAAGAATCTGAGCCAGAAACTTGAGAAGCTGAAGGGGAAAAAGGAAGAAGCCATGAAATTAAAGGAAACAAACACTAGTAACAACAATCTGCAAGCTGGAATGGAGAACAACATGTTCATGGCTTCTAATCTGCCATTACTTGAGCTCAGAGACCTAGGTTCCAGCATCGAAGTGATGCTTATCAGTGGACTGAACAGAAACTTCATGTTATATGAAGTAATTAGTGTCCTTGAAGAAGAAGGAGCTGAAGTTGTGAGCGCAAGTTTTTCCACTGTGGGTGATAAGATATTCCACACTGTTCATGCCCAGGTGAAAATATCTAGAGTTGGTGTAGAAACCACAAGAGTTTACCAGAGGCTTCATGATTTGATTGCTCCACTCAAAAGCTGGGAGTATTTTTAA 585 0.4137 MTKTSNESSSKVDRKTIERNRRIHMKALCFKLASLIPPHYLKHTKDMISQQDQLDIAASYIKNLSQKLEKLKGKKEEAMKLKETNTSNNNLQAGMENNMFMASNLPLLELRDLGSSIEVMLISGLNRNFMLYEVISVLEEEGAEVVSASFSTVGDKIFHTVHAQVKISRVGVETTRVYQRLHDLIAPLKSWEYF 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2565 194 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 7 183 - -
Alju06g2565 194 FunFam Transcription factor bHLH162 2 92 - -
Alju06g2565 194 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 12 77 IPR036638 GO:0046983
Alju06g2565 194 Coils Coil 54 84 - -
Alju06g2565 194 SMART finulus 15 70 IPR011598 GO:0046983
Alju06g2565 194 Pfam Helix-loop-helix DNA-binding domain 13 64 IPR011598 GO:0046983
Alju06g2565 194 Gene3D - 2 95 IPR036638 GO:0046983
Alju06g2565 194 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 64 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2565 Alju-ChrAlju06 52758250 52759143 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2565 9 185 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 36.066 1.98e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Alju06g2565 HLH 0.00014 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2565 06 52758250 52759143 Alju06g2565 06 52758250 52759143 ECH