Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2544 ATGCAGAGCACAGCTTTCACTCTCTCCCCTTCGCTTACTCTTCACAAACCTCGCAGACCTTTTATCTCCAATCGCTTCGATCCCACACATTTCTCTCTCTCTGCTTCCTCTTCCAAGCCCAATGAAAGCTCCTCTTCGTCGTTCCATCGCCGATATTGGTCCGTTGCTTCTTCCTCCTCCTCCTCTTTTAAGTTCAGGCCCTCGACATCTCTGCCCACTCCTGCTTCCTCTGATTCTGATGCTACTCGCTTTGAGACCCGGGCTACTTCTGTGCCGGAGAGCGCGGATGAGGGTTCTAACGCCTTATTGAAAACTCTGCAGCTTGGATCCTTGTTTGGCCTCTGGTACCTCTTCAATATATACTTTAATATCTACAATAAGCAGGTCTTGAAGGTGTACCAGTTTCCAGTAACTGTCACTGCGATTCAATTTACTGTTGGGGCTGTCCTTGTCTTATTTTTATGGACTTTTAATCTCTATAAAAGGCCTAAAATAAGTGGTTCACTGCTTGCAGCCATACTTCCTTTGGCTATGGTGCATACTTTAGGGAACCTTTTCACTAACATGAGCCTTGGAAAGGTAGCCGTGTCATTCACTCACACTATCAAAGCAATGGAGCCTTTCTTTTCAGTGGTTCTTTCTGCTATATTCCTTGGAGAGATGCCAACTGCATTGGTGGTCGCTTCACTTGTGCCTATTGTCGGTGGTGTGGCACTGGCATCTGTCACCGAGGCCTCATTTAATTGGGCTGGATTTGGGAGTGCAATGGCATCTAATTTGACGTTTCAGTCTCGTAATGTTCTCAGCAAAAAAGTCATGGTTAATAAAGAGGAAACAATGGACAATATAAACCTCTTCTCGACAATAACTGTTATGTCCTTCTTTTTGTTAGCACCTGTGGCTATCTTCATGGAAGGCGTCAAATTTACCCCTGCATACCTCCAATCTGCTGGGTTAAATGTTAGACAACTGTACACCAGATCTCTTATTGCTGCACTCTGTTTCCATGCATATCAACAAGTTTCTTATATGATATTGCAGAGGGTATCACCTGTTACCCACTCTGTGGGCAACTGTGTGAAGCGGGTTGTGGTCATTGTGAGCTCTGTCCTCTTCTTCAAAACACCTGTATCACTTATTAACGCTTTAGGCACTGGTATAGCTCTTGCCGGTGTGTTCCTTTATTCAAGGGCAAAGCGAATTAAGCCAAAGCCAAAGACTGCTTAA 1227 0.4482 MQSTAFTLSPSLTLHKPRRPFISNRFDPTHFSLSASSSKPNESSSSSFHRRYWSVASSSSSSFKFRPSTSLPTPASSDSDATRFETRATSVPESADEGSNALLKTLQLGSLFGLWYLFNIYFNIYNKQVLKVYQFPVTVTAIQFTVGAVLVLFLWTFNLYKRPKISGSLLAAILPLAMVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVVLSAIFLGEMPTALVVASLVPIVGGVALASVTEASFNWAGFGSAMASNLTFQSRNVLSKKVMVNKEETMDNINLFSTITVMSFFLLAPVAIFMEGVKFTPAYLQSAGLNVRQLYTRSLIAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVLFFKTPVSLINALGTGIALAGVFLYSRAKRIKPKPKTA 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2544 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 320 400 - -
Alju06g2544 408 MobiDBLite consensus disorder prediction 60 92 - -
Alju06g2544 408 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 106 406 IPR004696 GO:0016020|GO:0022857|GO:0055085
Alju06g2544 408 SUPERFAMILY Multidrug resistance efflux transporter EmrE 147 242 - -
Alju06g2544 408 Pfam Triose-phosphate Transporter family 106 396 IPR004853 -
Alju06g2544 408 PANTHER SOLUTE CARRIER FAMILY 35 107 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2544 Alju-ChrAlju06 52459692 52462743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2544 1 408 Antiporters AT5G33320 70.120 0.0 543
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2544 06 52459692 52462743 Alju13g1585 13 34146030 34149567 CCT
Alju06g2544 06 52459692 52462743 Alju13g1585 13 34146030 34149567 ECH
Alju06g2544 06 52459692 52462743 Alju06g2544 06 52459692 52462743 ECH