Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2518 ATGGCCTCGTCATCTTCGTCGTCGTCAAGCTCATACAATTCGCCATGTGCAGCCTGCAAATTCTTGAGGAGAAAATGCTTGCCAGGTTGCATATTCGCTCCTTACTTCCCACCGGAAGAGCCTCAGAAATTCGCCAACGTCCACAAGATATTCGGAGCCAGCAACGTCACTAAACTCCTCAACGAGCTCCTCCCTCACCAGAGAGAAGACGCCGTCAACTCCCTCGCCTACGAGGCCGAGGCTCGCGTCAGAGACCCCGTCTACGGCTGCGTTGGCGCCATCACTTTCCTCCAGAGACAGGTCCAGAGACTTCAGAAGGAGCTTGACGCCGCCAACGCCGATCTCCTTCGTTATGCCTGCCACGACATAGCGTCGCCGCCGCCTGGATTTCAACCGTTTGCTGCTACTTCTGACGGCGTTTACAGGCAATCTTCGAGCAGTTATTCGCTTCCTTGGGCTGATTCTTCTTCGGAGGACATCAATAATGGAGGAGGAGGAGGTAATTTGTGA 510 0.5431 MASSSSSSSSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAITFLQRQVQRLQKELDAANADLLRYACHDIASPPPGFQPFAATSDGVYRQSSSSYSLPWADSSSEDINNGGGGGNL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2518 169 MobiDBLite consensus disorder prediction 147 169 - -
Alju06g2518 169 ProSiteProfiles LOB domain profile. 14 115 IPR004883 -
Alju06g2518 169 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 13 134 - -
Alju06g2518 169 Coils Coil 94 121 - -
Alju06g2518 169 Pfam Lateral organ boundaries (LOB) domain 15 112 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2518 Alju-ChrAlju06 52153515 52154024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2518 6 147 AS2 family AT5G63090 75.325 1.22e-76 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju06g2518 LOB 5e-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2518 06 52153515 52154024 Alju13g1611 13 34375222 34375854 CCT
Alju06g2518 06 52153515 52154024 Alju13g1611 13 34375222 34375854 ECH
Alju06g2518 06 52153515 52154024 Alju06g2518 06 52153515 52154024 ECH