Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2508 ATGGCGACGGTGACGGGTTTCGCCACCATGGGGACGATCTTCTTCCTTCTCTTCTTCCTCCCTGTCGTCCTCATCTCTCCCGTCTCTGCACTCGACTTCCTCTTCAATTCCTTCAACGGCACCATCAACGGCACCGACCTTACTCTCACCAATGACGCTCGCATCGACCACACCGTCATCAGAATGACCAACGACTCCAACCAGTACTCCTTCGGACGATCCTTCTACCCCACCGCCATCGCAATGAAACCTAACTCCAATTCCTCCAACATTTCTTCCTTTTCCACTTCCTTTGTCTTCTCCATTTTGCCCCAGATCTCTACTAGCCCAGGTTTTGGTCTCGCCTTCGTCCTCACCAGTACCATGTCTCCGCCCGGCGCTCTCGCCAGTCAGTACTTTGGTCTCTTCACAAACGCCACGCATCCCACCGTCGCTCCCCTGTTCGCCGTCGAATTCGACACCGGTCAGAACCCAGAGTTCAACGACCCAGATGATAACCATATCGGAATCGATCTGAACAACATTGAATCTATCTTCAAAATATCAGCTGGCTACTATAATTCCACCGGTGGTTTCGTGCCTATTCGAATGCGTAATGGTCGTAACGTTCGAGCTTGGATAGAGTTTAATGGCGCAAATTTGGAGATAAATGTTACGGTTGCGCCAGTTGGCGTTGCTCGCCCATCTATGCCGACGCTTTCGTATAGAGATCCCGTTATAGCCAATTACGTGTCTGCAGAGATGTATGTTGGATTTTCTGCATCGAAAACGAATTGGGTTGAAACACAGAGACTTCTAGCCTGGAGCTTCAGCGATACTGGACCTGCGAGAGAGATTAATACGGCAAATTTGCCGGTATTTGAGCCAGAATCGTCGTCTTCGAAGCTTTCTGGTGGGGCGATTTCCGGGATCGTTATTGGATGCCTTGCTTTTATGATGATTTGTGGTTCTGGATTTTACTTGTGGTGGCGAAACAAGAAATTGAAAGAGCAAGAGGACGAAATTGAAGATTGGGAGCTAGAATATTGGCCCCACAGATTCTCATATGAGGAGCTCAGCGTGGCTACTGAAGAATTTCGCAGGGAGAATCTCTTAGGTTCAGGAGGATTCGGAAGAGTCTACAAAGGAACACTGTCGAACAACACTGAACTTGCAGTCAAATGCGTCAACCACGATTCCAAGCAAGGGTTACGAGAATTCATGGCGGAGATCTCGAGCATGGGCAGGCTTCAACACAAGAATTTGGTTCAAATGAGAGGATGGTGCAGAAAAGGGAACGAGCTCATGCTTGTTTACGACTATATGCCCAATGGAAGTCTGAACAAATGGATCTTCGACAAACCTGAGAAGCTTCTAGGCTGGGAACGTCGTCACCGAATCCTCGTCGACGTCGCCGAAGGGCTAAACTATCTACACCATGGTTGGGATCAAGTGGTGATACACAGAGACATTAAATCGAGCAACATATTGCTGGATTCGGAAATGAGAGGTAGATTGGGGGATTTTGGTCTCGCTAAGCTTTATCAACAAGGTGAGGTTCCAAATACGACGAGAGTGGTAGGTACGTTAGGGTATTTGGCACCTGAGCTGGCGTCGGCGGCTGCGCCGACGTCGGCGAGCGATGTGTACAGCTTCGGAGTGGTGTTGTTGGAGGTTGCGTGCGGGCGGAGACCGATCGAGACGTCGGCGCCGGAGGAGGAGGTGGTGCTGATTGATTGGGTGAGGGATTTGTATGCGGAAGGGAGTGTGGTTGAGGCGGCGGATTCGAGGATTAAGGGTGAGTACGACGAGGGAGACATGGAGATGATTTTGAAGCTTGGTTTAGCTTGTTGTCACCCTGATCCGCAGAGGAGGCCGACCATGAAGGAGGTCGTTGTGCTTTTGGTGGGCGAGGAACTCTCGGCGGCGCCGGTGGAATCGTTGTCTGAGTTAGCTCGCGGTGAGAGCGGTACGGTGAATGGTGACGGCGACTGTGAATCACAAGAGGCGGCGCAACGGGGTTCAATGCATGCGGTTTAA 2019 0.5082 MATVTGFATMGTIFFLLFFLPVVLISPVSALDFLFNSFNGTINGTDLTLTNDARIDHTVIRMTNDSNQYSFGRSFYPTAIAMKPNSNSSNISSFSTSFVFSILPQISTSPGFGLAFVLTSTMSPPGALASQYFGLFTNATHPTVAPLFAVEFDTGQNPEFNDPDDNHIGIDLNNIESIFKISAGYYNSTGGFVPIRMRNGRNVRAWIEFNGANLEINVTVAPVGVARPSMPTLSYRDPVIANYVSAEMYVGFSASKTNWVETQRLLAWSFSDTGPAREINTANLPVFEPESSSSKLSGGAISGIVIGCLAFMMICGSGFYLWWRNKKLKEQEDEIEDWELEYWPHRFSYEELSVATEEFRRENLLGSGGFGRVYKGTLSNNTELAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNKWIFDKPEKLLGWERRHRILVDVAEGLNYLHHGWDQVVIHRDIKSSNILLDSEMRGRLGDFGLAKLYQQGEVPNTTRVVGTLGYLAPELASAAAPTSASDVYSFGVVLLEVACGRRPIETSAPEEEVVLIDWVRDLYAEGSVVEAADSRIKGEYDEGDMEMILKLGLACCHPDPQRRPTMKEVVVLLVGEELSAAPVESLSELARGESGTVNGDGDCESQEAAQRGSMHAV 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2508 672 FunFam L-type lectin-domain containing receptor kinase S.4 435 640 - -
Alju06g2508 672 ProSitePatterns Protein kinases ATP-binding region signature. 365 387 IPR017441 GO:0005524
Alju06g2508 672 CDD TM_EGFR-like 297 331 - -
Alju06g2508 672 CDD STKc_IRAK 365 625 - -
Alju06g2508 672 ProSiteProfiles Protein kinase domain profile. 359 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2508 672 SUPERFAMILY Protein kinase-like (PK-like) 335 628 IPR011009 -
Alju06g2508 672 MobiDBLite consensus disorder prediction 646 672 - -
Alju06g2508 672 CDD lectin_legume_LecRK_Arcelin_ConA 31 274 IPR001220 GO:0030246
Alju06g2508 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
Alju06g2508 672 Gene3D Phosphorylase Kinase; domain 1 322 434 - -
Alju06g2508 672 SMART serkin_6 359 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2508 672 Gene3D Transferase(Phosphotransferase) domain 1 435 636 - -
Alju06g2508 672 FunFam L-type lectin-domain containing receptor kinase S.1 344 434 - -
Alju06g2508 672 Pfam Protein kinase domain 360 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2508 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 287 IPR013320 -
Alju06g2508 672 Pfam Legume lectin domain 31 284 IPR001220 GO:0030246
Alju06g2508 672 PANTHER - 52 632 - -
Alju06g2508 672 Gene3D - 29 288 - -
Alju06g2508 672 FunFam L-type lectin-domain containing receptor kinase S.4 29 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2508 Alju-ChrAlju06 52034687 52036705 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2508 26 630 Receptor kinase-like Gene Family AT1G15530 70.115 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Alju06g2508 Pkinase 2.6e-52 CL0016