Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2507 ATGGATTCCCAACACACGCCCAAAGTTAAATTCCTCTGCAGCTACGGCGGCAAGATTCTTCCCCGTTCCACCGACGGTGTCCTCCGTTACGTCGGCGGCTACACCAGAGTCCTCCCTGTCCATCATTCCATTTCCTTCTCAGACCTTATGGTAAAGATCGTAGAGTTCTGTGGTTCGTCTGTAACCTTGAAATGTTCATTGCCCAATGGAGACCTCGAGACATTGATTACCATTGCTAACGACGAGGATTTGGCCATTATTTTTGAGGAATATAAACTGGCTTCGTCCTCTAAGGAAAATCCGTTGAAGATCAGAGCCGTTCTTTCGCCGCCCAGGTCTCTCAAGAAAGTATCTGTTCCTCCGCTGCTGCGTCTTGCGTATGGGTATATGGTTCCCCCTATGGTCGCGATCCGGTAG 417 0.4964 MDSQHTPKVKFLCSYGGKILPRSTDGVLRYVGGYTRVLPVHHSISFSDLMVKIVEFCGSSVTLKCSLPNGDLETLITIANDEDLAIIFEEYKLASSSKENPLKIRAVLSPPRSLKKVSVPPLLRLAYGYMVPPMVAIR 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2507 138 Gene3D - 29 108 - -
Alju06g2507 138 CDD PB1_UP2 12 108 - -
Alju06g2507 138 PANTHER OS05G0427100 PROTEIN-RELATED 4 115 - -
Alju06g2507 138 SMART PB1_new 23 109 IPR000270 GO:0005515
Alju06g2507 138 SUPERFAMILY CAD & PB1 domains 25 117 - -
Alju06g2507 138 Pfam PB1 domain 28 103 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2507 Alju-ChrAlju06 52020248 52020766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2507 1 108 MAP Kinase Kinase Kinase AT3G46920 42.202 1.98e-24 95.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2507 06 52020248 52020766 Alju13g1617 13 34438544 34439838 CCT
Alju06g2507 06 52020248 52020766 Alju06g2507 06 52020248 52020766 ECH