Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2473 ATGAAGAGGCCGCGTTTAGGTTGGGACATCCCTGAGACCCCAAAGGCTCAGGTAGGATTGTTTTGTGGACAAGATGTTGGAAATTTTTCAAGCTATGCATCTTCAAGTGGGCCCTCAGAGCATACAAATAATTCTCTAAATGTTAAGGGAGTAGCTCGAAATGGTTCTCCCCCATGGCGAGATGATGACAAAGATGGGCATTACATGTTTGCGCTTGGAGAAAATTTAACTTCTCGCTATAAGATACATAGCAAAATGGGGGAAGGAACTTTTGGTCAAGTCTTGGAATGCTGGGACCGAGAACGGAAGGAGATGGTGGCAATAAAAATTGTTCGTGGGATAAAGAAGTATAGAGAAGCTGCCATGATAGAGATTGAGGTGCTGCAACAGCTTGCTAAACATGATAAAGGTGGCAGTCGTTGTGTACAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTCTTTGAGAAACTTGGGCCAAGCTTATACGATTTTCTTCGGAAAAACAATTATCGCTCATTTCCCATTGATCTTGTTCGTGAGATTGGCAGACAACTATTGGAATGTGTAGCATTCATGCATGATTTGCATATGATCCATACTGACTTGAAGCCAGAAAACATACTGCTTGTCTCATCAGACTATGTTAAAGTTCCCGACTACAGGAGCTCTTCCAGATCGCCAGGTATTTATTTCAAGAGAGTACCAAAGTTAAGTGCCATCAAAGTTATTGATTTTGGCAGCACCACTTATGAGCGAGAGGACCAGACTTACATTGTATCAACACGTCATTATAGGGCACCTGAAGTTATACTTGGACTTGGATGGAGTTATCCATGTGATATATGGAGTGTGGGTTGCATATTGATAGAATTATGCACGGGTGAAGCTTTGTTTCAGACTCATGAGAATTTGGAGCACCTTGCAATGATGGAAAGGGTGCTTGGACCGTTGCCTCAGCACATGTTGAAGAGAGCAGACCGACATGCTGAGAAGTATGTTAGAAGGGGTAGATTGATTTGGCCAGAGGGGGCCACTTCTAGGGATAGTATTAAAGCTGTAATGAAGCTGCCTCGGCTTCAGAATCTGGTAATGCAGCATGTGGATCATTCAGCCGGGGATCTGATACATGTGTTGCAGGGTTTACTTAGATATGACCCTTCTGAAAGATTAACTGCTAGGGAGGCTCTAAGACATCCCTTCTTTACGAGAGATCACCTTAGGAGATAG 1239 0.4302 MKRPRLGWDIPETPKAQVGLFCGQDVGNFSSYASSSGPSEHTNNSLNVKGVARNGSPPWRDDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLAKHDKGGSRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFPIDLVREIGRQLLECVAFMHDLHMIHTDLKPENILLVSSDYVKVPDYRSSSRSPGIYFKRVPKLSAIKVIDFGSTTYEREDQTYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILIELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKRADRHAEKYVRRGRLIWPEGATSRDSIKAVMKLPRLQNLVMQHVDHSAGDLIHVLQGLLRYDPSERLTAREALRHPFFTRDHLRR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2473 412 SUPERFAMILY Protein kinase-like (PK-like) 67 409 IPR011009 -
Alju06g2473 412 ProSiteProfiles Protein kinase domain profile. 80 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2473 412 Pfam Protein kinase domain 80 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2473 412 MobiDBLite consensus disorder prediction 32 60 - -
Alju06g2473 412 SMART serkin_6 80 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2473 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Alju06g2473 412 Gene3D Transferase(Phosphotransferase) domain 1 134 405 - -
Alju06g2473 412 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 40 408 - -
Alju06g2473 412 MobiDBLite consensus disorder prediction 32 51 - -
Alju06g2473 412 CDD PKc_CLK 67 405 - -
Alju06g2473 412 FunFam Serine/threonine-protein kinase AFC2 156 405 - -
Alju06g2473 412 Gene3D Phosphorylase Kinase; domain 1 67 160 - -
Alju06g2473 412 FunFam Serine/threonine-protein kinase AFC2 67 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2473 Alju-ChrAlju06 51719546 51723011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2473 85 405 Core Cell Cycle Gene Families AT1G76540 26.205 1.35e-28 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Alju06g2473 Pkinase 3.4e-50 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2473 06 51719546 51723011 Alju06g2473 06 51719546 51723011 ECH