Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2446 ATGCTTCAAAGCTTAATTGATGCATATGAAAAGCTGCAGAAGGGGCGCCTTACACTGAACAAGACAAACATTCAGATTTCCCAGGGAAATCCAATTGATCCAGAGCTCCATTTCAGAGACCACATACGGACTATTACACAGAGATATCTTGCCTCTGAAGAGGCAGCACAGGAAGACATGATCATCAATTCTGAGGTGAATGAAGATGAGGTCCTGGTGGTTAATAGCATTCTTCTGTTGCACTTTGTAGTGAAAGAGAGTCGTGGGGCTTTAAACTCGGTCCCTCAGACACTTCATAAACTCTCACCAAAAGTGTTGGTTATGGTTGAGCAAGACTCAAGCCATAATGGACCCTTTTTCCCTGGGGAGTTCATGGAAGCGCTTCATTATCTCTGCCATTTTTTACTCTTTGGATGCCATGTTACCAAAGTATGA 435 0.4322 MLQSLIDAYEKLQKGRLTLNKTNIQISQGNPIDPELHFRDHIRTITQRYLASEEAAQEDMIINSEVNEDEVLVVNSILLLHFVVKESRGALNSVPQTLHKLSPKVLVMVEQDSSHNGPFFPGEFMEALHYLCHFLLFGCHVTKV 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2446 144 ProSiteProfiles GRAS family profile. 1 144 IPR005202 -
Alju06g2446 144 Pfam GRAS domain family 65 132 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2446 Alju-ChrAlju06 51405864 51407578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2446 68 130 GRAS Transcription Factor Family AT3G03450 41.270 5.12e-09 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju06g2446 GRAS 2.5e-12 CL0063