Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Alju06g2443 | ATGCTTGGTAACACCGGATGTCCCATTGATGATAGAAGTGCTTCATTGTTGCCAAATTCTGACGAAGATTCATCTAGATTGCATGTCTTCTGTCTGGAGCATGCTGCTGAAGTGGAGCAGCGACTTCGCCCAATAGGAGGGGCACACATATTACTCCTTTGTCATCCAGAAATGCCACCCCAAAAGGTGAGGAGAGGATCTAGTCGGCTCTGGATAGTGAGGAAGCTATTCCCGGAAATGCGGACTGGGCTTCAAAGCTCGGAATCAATCTCTTCTATAGTGCCAATCTTAGCCGCTCTCCTCTCTACAGTAACCCAAAGGAAGAAAGCGAACAATGCTACAGCTCTGAAGGTTTCCAAAACGAAGGATGAGGAAGTAGAATATGAGTGTGATATTGATGGGTGCACAATGAGTTTTGGCTCAAAACAGGAGCTAGCAGTGCACAAGAGAAACATTTGTCCTGTAAAGGGATGCGGAAAGAAATTTTTCTCGCATAAATATCTGGTGCACCACCGTCGAGTTCACGAGGATGACCGCCCTCTGAGGTGCCCTTGGAAGGACTGCAAGATGACCTTCAAGTGGGCATGGGCCCGTACTGAGCATATTCGAGTGCATACCGGAGCTCGTCCATATGTTTGTGCAGAGCCAGGGTGTGGGCAAACATTCAGATTTGTTTCTGATTTCAGTCGCCACAAGCGAAAGACCGGCCATTCAACAAAGAAGAGTCGTTAA | 732 | 0.4768 | MLGNTGCPIDDRSASLLPNSDEDSSRLHVFCLEHAAEVEQRLRPIGGAHILLLCHPEMPPQKVRRGSSRLWIVRKLFPEMRTGLQSSESISSIVPILAALLSTVTQRKKANNATALKVSKTKDEEVEYECDIDGCTMSFGSKQELAVHKRNICPVKGCGKKFFSHKYLVHHRRVHEDDRPLRCPWKDCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSTKKSR | 243 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Alju06g2443 | 243 | Gene3D | Classic Zinc Finger | 152 | 201 | - | - | |
| Alju06g2443 | 243 | Gene3D | Classic Zinc Finger | 202 | 243 | - | - | |
| Alju06g2443 | 243 | Gene3D | Classic Zinc Finger | 102 | 151 | - | - | |
| Alju06g2443 | 243 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
| Alju06g2443 | 243 | FunFam | Probable lysine-specific demethylase ELF6 | 178 | 207 | - | - | |
| Alju06g2443 | 243 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 153 | 175 | IPR013087 | - | |
| Alju06g2443 | 243 | SUPERFAMILY | beta-beta-alpha zinc fingers | 152 | 184 | IPR036236 | - | |
| Alju06g2443 | 243 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 211 | 242 | IPR013087 | - | |
| Alju06g2443 | 243 | FunFam | Probable lysine-specific demethylase ELF6 | 208 | 237 | - | - | |
| Alju06g2443 | 243 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 181 | 210 | IPR013087 | - | |
| Alju06g2443 | 243 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 183 | 205 | IPR013087 | - | |
| Alju06g2443 | 243 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 213 | 237 | IPR013087 | - | |
| Alju06g2443 | 243 | SMART | c2h2final6 | 128 | 150 | IPR013087 | - | |
| Alju06g2443 | 243 | SMART | c2h2final6 | 181 | 205 | IPR013087 | - | |
| Alju06g2443 | 243 | SMART | c2h2final6 | 151 | 175 | IPR013087 | - | |
| Alju06g2443 | 243 | SMART | c2h2final6 | 211 | 237 | IPR013087 | - | |
| Alju06g2443 | 243 | PANTHER | ZINC FINGER PROTEIN ZIC AND GLI | 123 | 236 | - | - | |
| Alju06g2443 | 243 | SUPERFAMILY | beta-beta-alpha zinc fingers | 191 | 235 | IPR036236 | - | |
| Alju06g2443 | 243 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 151 | 180 | IPR013087 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Alju06g2443 | Alju-ChrAlju06 | 51393737 | 51394889 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Alju06g2443 | 16 | 59 | C2H2 Transcription Factor Family | AT3G48430 | 72.727 | 3.80e-17 | 78.6 |
Transcription factors information