Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2432 ATGAAGGCACTGTTTAGTGTCATGAACTCTTGTTTACTGGCTTGGATATTCATCTCCCTACGAATGGCTTCAGGCGAGGGGTTTCTGACAGATGAGCAGAGGGAAATGCTAAAAAATGCCTGCAATAATGTGGAAAATTTTTCTTCATCTCCGAAATCTCCTACATCCTTTGTTGCTGACCATCAAATAAAAGCTCCTGCTGGTAGTAAGGCCCAAACTGCTGGGATTGCTGTGAGGCATGTGCGGCGATCACATTCTGGAAAGTTTGTGCGGGTGAAGAAGGATGGTGCTGGTGGTAAGGGCACTTGGGGAAAATTGCTTGATACTGATGGTGAATCTCATATAGACAGGAAAGACCCAAATTATGATAGTGGTGAGGAACCCTATCAGCTGGTGGGGTCTACTGTCACTGACCCCTTGGATGAATTCAAGAAGGCAGTTGTTTCCACCATCGAGGAATATTTCAGCACTGGTGATGTGGATTTAGCTGCCTCTGATCTCAGAGAACTTGGTTCAAGTGAATATTATCCATACTTCATCAAGCGCCTTGTGTCTATGGCCATGGATAGGCATGATAAGGAGAAAGAAATGGCTTCTGTTTTGCTTTCAGCATTGTATGCTGATGTGATTAGTCCTGCACAGATTAGGGATGGATTTTTTATGCTTCTTGAATCTGCTGATGATCTTGCAGTGGACATACTGGATGCTGTTGACATCCTTGCTTTATTTCTGGCTCGGGCTGTTGTTGACGATATCCTTCCTCCTGCCTTTCTTACTAGGGCAAAAAAGGCTCTTCCTGAGTCATCCAAGGGGGTTCAGGCTATCCAGACTGCAGAGAAGAGTTATCTCTCAGCTCCACATCATGCAGAGCTTGTAGAGAGGCGATGGGGTGGTAGCACACACATCACTGTTGAAGAAGTAAAGAAGAAGATTTCTGATTTACTAAAAGAATATGTTGGCAGTGGTGATACGGTTGAAGCTTGCAGGTGCATAAGGGAGTTGGGGGTTTCATTTTTTCATCATGAGGTTGTGAAGAGGGCTCTGGTAGTTGCCATGGAGAACTGTTCAGCAGAATCTTCAATGTTGAAATTATTAAGAGAAGCAGCAGAAGAAGGGCTCATTAGTTCCAGCCAAATGGTGAAAGGTTTTTCTCGGTTGGCAGATGGCCTAGATGATCTTGCTCTTGATATTCCATCAGCCAAAACTTTGTTTCAATCATTGGTACCCAGGGCAATATCTGAAGGATGGCTTGATGCTTCATATTTGAAACCGTCTGGTGAAGATGGGGATGTCCCAGTTGAGGATGAAAAAGTGAGGAACTACAAAAAGGAGGCCGTAACTATAATTCATGAGTATTTTCTCTCTGATGATATTCCTGAGCTCATTCGGAGTCTTGAAGATCTTGGAGCACCTGAGTTTAACCCAATATTTTTGAAGAAGCTAATTACTCTTGCCATGGACAGAAAAAACAGAGAAAAGGAAATGGCATCAGTACTACTATCTGCTCTTCATATTGAGATATTCTCCACAGAGGATATAGTTAATGGTTTTGTCATGCTTCTGGAAAGTGCTGAAGATACTGCACTGGATATATTGGACGCTTCAAATGAACTTGCCCTGTTTTTAGCTCGGGCTGTGATTGATGATGTGTTGGCCCCTCTGAATTTAGAGGAAATTGGCAGCAGGTTGCCACCTAAATGCAGTGGCAGTGAAACTGTGCGAATGGCTCGATCACTCATTGGGGCTCGTCATGCTGGTGAGAGGCTATTGAGATGTTGGGGTGGGGGTACTGGATGGGCTGTGGAGGATGCCAAGGACAAGATCATGAAGCTGTTGGAGGAGTATGAAAGTGGGGGTGTGGTGAGTGAAGCATGCCAGTGTATTCGCGATCTAGGAATGCCTTTCTTCAACCATGAGGTGGTGAAGAAAGCTCTGGTCATGGCCATGGAGAAGAAGAATGATAGGATGCTGGATCTGCTGCAGGAGTGCTTCAGTGAAGGTCTCATTACTATCAATCAGATGACCAAAGGTTTCACCCGCATCAAGGACGGTCTTGACGATCTGGCTCTGGACATTCCAAATGCACGTGATAAATTCGCCTTCTATGTGGAGTATGCAACCAACAAGGGTTGGGTTCTACCTTCATTTGATTCCCCAGATGCCTGA 2166 0.4478 MKALFSVMNSCLLAWIFISLRMASGEGFLTDEQREMLKNACNNVENFSSSPKSPTSFVADHQIKAPAGSKAQTAGIAVRHVRRSHSGKFVRVKKDGAGGKGTWGKLLDTDGESHIDRKDPNYDSGEEPYQLVGSTVTDPLDEFKKAVVSTIEEYFSTGDVDLAASDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIRDGFFMLLESADDLAVDILDAVDILALFLARAVVDDILPPAFLTRAKKALPESSKGVQAIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKISDLLKEYVGSGDTVEACRCIRELGVSFFHHEVVKRALVVAMENCSAESSMLKLLREAAEEGLISSSQMVKGFSRLADGLDDLALDIPSAKTLFQSLVPRAISEGWLDASYLKPSGEDGDVPVEDEKVRNYKKEAVTIIHEYFLSDDIPELIRSLEDLGAPEFNPIFLKKLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGSRLPPKCSGSETVRMARSLIGARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNARDKFAFYVEYATNKGWVLPSFDSPDA 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2432 721 ProSiteProfiles MI domain profile. 306 427 IPR003891 -
Alju06g2432 721 PANTHER PROGRAMMED CELL DEATH 4 24 717 IPR039778 GO:0045892
Alju06g2432 721 SUPERFAMILY ARM repeat 438 596 IPR016024 -
Alju06g2432 721 SMART ma3_7 307 418 IPR003891 -
Alju06g2432 721 SMART ma3_7 604 713 IPR003891 -
Alju06g2432 721 SMART ma3_7 441 552 IPR003891 -
Alju06g2432 721 SMART ma3_7 143 254 IPR003891 -
Alju06g2432 721 FunFam programmed cell death protein 4 430 584 - -
Alju06g2432 721 Pfam MA3 domain 442 551 IPR003891 -
Alju06g2432 721 Pfam MA3 domain 143 254 IPR003891 -
Alju06g2432 721 Pfam MA3 domain 307 418 IPR003891 -
Alju06g2432 721 Pfam MA3 domain 605 711 IPR003891 -
Alju06g2432 721 Gene3D - 293 424 - -
Alju06g2432 721 Gene3D - 591 718 - -
Alju06g2432 721 FunFam Programmed cell death protein 4 292 427 - -
Alju06g2432 721 ProSiteProfiles MI domain profile. 603 721 IPR003891 -
Alju06g2432 721 FunFam programmed cell death protein 4 134 285 - -
Alju06g2432 721 SUPERFAMILY ARM repeat 140 300 IPR016024 -
Alju06g2432 721 SUPERFAMILY ARM repeat 303 424 IPR016024 -
Alju06g2432 721 Gene3D - 135 284 - -
Alju06g2432 721 Gene3D - 431 583 - -
Alju06g2432 721 ProSiteProfiles MI domain profile. 440 561 IPR003891 -
Alju06g2432 721 ProSiteProfiles MI domain profile. 142 263 IPR003891 -
Alju06g2432 721 SUPERFAMILY ARM repeat 600 716 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2432 Alju-ChrAlju06 51195139 51198719 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2432 607 703 Eukaryotic Initiation Factors Gene Family AT5G57870 32.000 2.15e-09 58.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2432 06 51195139 51198719 Alju06g2432 06 51195139 51198719 ECH