Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2395 ATGTCAAGATGGTTGTCAGATGATTACTCGCCAAGGAATGCATCTGATGATGATGACATGCACGAAAAAGAGACATCAAGCCCAGAAAGTGGTGAATTCATATGTGAAAGTTCAGAGGGCAAAAAATCTAGATCATCAAGAAATAGTGCAGGAGTTGATTGTTTCTGCCCTTCAAGTACAGAAGATTTTGATTCTGAGAAGTTACTTGTGGACAATATGGATGAAGATGAGGAACATAGTGGAACTTCTTATGTTAGCCACCCTTCATCAGATCCTGAAGATGGCGGCTTAGTAGCAATGCAGAGAAACACCAACAGCATCCAGAGTTGCAGAAGTGTTTCAGAATTTGAAATGATCAAGAAAATAAACGAAGGAACATATGGTATTGTCTATAAAGCTAAGGATAAGAAGACCGGGGAGATTGTAGCGTTGAAGAAGGTGAAGATGAATATGGAAAGAGATGGCTTTCCAATGTCCTCTTTGAGGGAAATAAATATTCTCTCATCTTTTAATCATCCTTCTATTGTGGAAGTTAAAGAAGTGGTTGTAGATGATTTTGATGGTGTTTTCATGGTAATGGAGTATATGGAGTGTGACCTTAAAGGCCTGATACAGATTATGAAGCGGCCCTTTAGTATAGGTGAAATAAAATCCTTGATGATGAAACTTCTCAAGGGTGTCAAGTATCTCCATGACAATTGGATTCTTCACAGAGATTTGAAGACATCTAATATTCTCATAAATAAAGAGGGTGAGCTGAAAATATGTGACTTCGGTTTATCCCGTCATTATGGAAGCCCACTCAAGCCATATACTCCTCTTGTGGTTACTTTGTGGTATAGGGCTCCTGAGCTTCTTTTAGGTGCTAAAGAATACTCAACAGCGATTGATATGTGGTCAATTGGTTGCATAATGGCTGAATTAGTTGCTAAGTCACCTCTATTCCAGGGAAAATCTGAGATTGAGCAGCTTAATAACATTTTCCAAACCCTGGGCACACCTAATGAGAAAATTTGGCCTGGAGTGTCCAAATTGTCTGGATTTAAGGGCAACTTTGTCAAGCATCCGCACAATCTATTGCGGAAGAAGTTTCCAGTTGCATCCTTCATTGGATCGCCTGTTCTTTCTGAACTGGGATTTGACTTGTTGAGCAAGCTTCTAACTTATGACCCTGAAAAGAGGATATCTGCAGAAGCTGCTCTTCTTCATGATTGGTTCCATGAAGCCCCTCTTCCCAATTCTGACTTCAATATCAGATTACCTACACAGCGCTGCTAG 1278 0.3998 MSRWLSDDYSPRNASDDDDMHEKETSSPESGEFICESSEGKKSRSSRNSAGVDCFCPSSTEDFDSEKLLVDNMDEDEEHSGTSYVSHPSSDPEDGGLVAMQRNTNSIQSCRSVSEFEMIKKINEGTYGIVYKAKDKKTGEIVALKKVKMNMERDGFPMSSLREINILSSFNHPSIVEVKEVVVDDFDGVFMVMEYMECDLKGLIQIMKRPFSIGEIKSLMMKLLKGVKYLHDNWILHRDLKTSNILINKEGELKICDFGLSRHYGSPLKPYTPLVVTLWYRAPELLLGAKEYSTAIDMWSIGCIMAELVAKSPLFQGKSEIEQLNNIFQTLGTPNEKIWPGVSKLSGFKGNFVKHPHNLLRKKFPVASFIGSPVLSELGFDLLSKLLTYDPEKRISAEAALLHDWFHEAPLPNSDFNIRLPTQRC 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2395 425 FunFam Cyclin-dependent kinase G-2 198 424 - -
Alju06g2395 425 Gene3D Transferase(Phosphotransferase) domain 1 198 417 - -
Alju06g2395 425 SUPERFAMILY Protein kinase-like (PK-like) 110 412 IPR011009 -
Alju06g2395 425 Pfam Protein kinase domain 116 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2395 425 MobiDBLite consensus disorder prediction 1 51 - -
Alju06g2395 425 MobiDBLite consensus disorder prediction 10 43 - -
Alju06g2395 425 PANTHER CELL DIVISION PROTEIN KINASE 114 412 - -
Alju06g2395 425 SMART serkin_6 116 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2395 425 CDD STKc_CDC2L1 110 406 IPR045267 GO:0004674|GO:0005524|GO:0006468
Alju06g2395 425 Gene3D Phosphorylase Kinase; domain 1 98 197 - -
Alju06g2395 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Alju06g2395 425 FunFam cyclin-dependent kinase G-2 isoform X1 101 197 - -
Alju06g2395 425 ProSiteProfiles Protein kinase domain profile. 116 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2395 Alju-ChrAlju06 50709389 50711103 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2395 107 412 Core Cell Cycle Gene Families AT5G10270 47.205 6.38e-89 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Alju06g2395 Pkinase 4.7e-74 CL0016