Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2387 ATGGCTAGCTGTGGTTCTCTTTCATTATGTCCATACAGCTTTTATCGTCACCCGAACCCAAAAAGTCGTCCTATTTTGTGCTCGGTTGGCTCTTCTTCGCTCGTAGGTGTTGATGGATCTAAAGTACCACGCAAAAGAACAAGAAAGATTGAAGGTCCTGGAAAAAGCATGGAAGACTCTGTTCAACGCAAGATGGAGCAATTTTATGAAGGATCTAATGGGCCACCCCTGCGAGTTCTTCCTATTGGTGGGTTGGGTGAAATTGGGATGAATTGCATGCTTGTTGGGAACCATGATCGTTATATCCTTATTGATGCTGGTGTCATGTTCCCAGACTATGATGAGCTTGGAGTCCAAAAGATTATACCTGATACGACATTTATAAGAAAATGGAGGCACAAGATTGAAGCAGTTGTTATAACGCATGGCCATGAAGATCATATTGGTGCGTTGCCTTGGGTCATACCAGCATTGGATGCCCATACACCAATTTTTGCATCTTCCTTTACAATGGAGCTTATTAGAAAACGTTTGAAGGAGCATGGTATTTTTGTTCCATCAAGACTCAAAGTATTTCGAACAAGGAAGAAGTTTGTGGCTGGGCCGTTTGAAATAGAGCCTATCAGGGTGACCCATTCTATCCCTGATTGTTGTGGATTAGTTCTTCGCTGTTCTGATGGTACTATTCTTCATACTGGGGACTGGAAGATTGATGAATCACCACTAGATGGTAAAGTTTTTGACCGTGATGTTTTGGAGGAACTCTCTAAAGAAGGAGTAACATTAATGATGAGTGATTCAACAAACATACTTTCACCTGGTAGAACAATTAGTGAATCTACGGTGGCAGATGCACTGTTAAGGCATATTTCTGCTGCTAAAGGAAGGGTTATTACAACGCAGTTTGCATCAAATATACATCGTCTTGGAAGTGTGAAAGCTGCAGCTGATTTAACTGGTAGAAAAATGGTGTTTGTTGGCATGTCTTTAAGGACATATCTAGATGCAGCTTGGAAGGATGGAAAGGCACCGTTTGATCCGTCCGCCCTGGTGAAAGTGGAGGACATTGATGCTTATGCTCCCAAGGATTTACTGATTGTAACAACTGGATCTCAGGCAGAACCTCGTGCTGCCTTGAATCTTGCATCGTATGGTGGTAGTCATTCTTTCAAACTGACCAAGGAAGACATAATTTTGTATTCAGCTAAGGTTATCCCTGGTAATGAGTCTCGTGTGATGAAAATGATGAACCGCATATCAGAGATTGGATCATCAATAATAATGGGGAAGAATGAGGGGCTGCACACATCTGGTCATGCGTATCGTGGAGAATTGGAGGAAGTACTTAAAATAGTGAAACCGCAACATTTTCTTCCCATACATGGAGAACTCTTGTTCCTGAAGGAGCATGAATTACTTGGAAAGTCAACTGGCATTCGACACACTGCTGTTATTAAGAATGGAGAGATGCTTGGCGTTTCACACTTAAGAAACAGAAGAGTCCTTTCCAATGGTTTTGTTTCCCTTGGAAAAGAGAATCTACAGTTGAAATACAGTGATGGGGACAAAGCATTTGGTACATCAAGCGAACTCTTCATTGATGAAAGATTGAGAATTGCTTTGGATGGAATTATTGTGGTCAGCATGGAAATATTTCGCCCTCAAAATAATGAGAGTCAGGTTGAAAACACCTTAAAAGGAAAGATAAGGATTGCCACAAGATGCCTATGGCTTGACAAAGGAAAGCTGTTGGATGCGCTTCATAAAGCTGCTCATGCTGCACTTTCAAGCTGCCCGGTAAACTGTCCATTGGCTCACATGGAAAGAACTGTATCTGAGTTATTGAGGAAGTTGGTGAGGAAGTATAGTGGCAAAAGACCAGAAGTTATTGCTATTGCTGTAGAAAACCCTGCCGCCGTTCTTGCTGATGAGGTAAAAGCAAGGCTGTCAGGAAAATCTCATATGGGCTTTGAGATGCCATCATTGAGAAAAGCTTTGGATGGACGTAAAGAGGAAAAGAAGTCCAGTAAAATACCAATAAAAGGAGATGATGGCGCTGATGTTGAAGGACTCCTACCTGAGGATGATATTCCTACTCCGAGTGGAGCCGAGGGTGATTTTGCTGATTCAGAGGATTCAGATGGATTTTGGAAATCGTTCATCACACCTTCAACCACAGAAAAGTCAATCAAAGCTACCAATGGTTATATTCCACGAAAGCAGCAAGAGTCCCAGCCGACGAAAGATGATTCTGAAGACTCTGAAGAAGGCAAGTCTGAACCCAAGCCTTCAAAAACAGTGAAGAGAAATAAATGGAAACCTGAGGAAGTGAAGAAGCTGATCGATATGCGTGGGGAGCTGAACGAGAGGTTTCAAGTTGTGAAGGGAAGAATGGTCCTTTGGGAGGAGATATCTCAAAAGTTGCTGGCTGATGGTATCAACAGAAGTCCAGGGCAATGCAAATCTGTGTGGACTTCTTTGATACAAACATATGAGGAGATCAAGAATGGGAAGAGCAGCAATAAAAGCTGGCCATATTTGGAGGACATGGACAGGATGATGTCGGATAACGAGGCACTAGCGGCAAAATGA 2592 0.4248 MASCGSLSLCPYSFYRHPNPKSRPILCSVGSSSLVGVDGSKVPRKRTRKIEGPGKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWRHKIEAVVITHGHEDHIGALPWVIPALDAHTPIFASSFTMELIRKRLKEHGIFVPSRLKVFRTRKKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDESPLDGKVFDRDVLEELSKEGVTLMMSDSTNILSPGRTISESTVADALLRHISAAKGRVITTQFASNIHRLGSVKAAADLTGRKMVFVGMSLRTYLDAAWKDGKAPFDPSALVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGGSHSFKLTKEDIILYSAKVIPGNESRVMKMMNRISEIGSSIIMGKNEGLHTSGHAYRGELEEVLKIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVSHLRNRRVLSNGFVSLGKENLQLKYSDGDKAFGTSSELFIDERLRIALDGIIVVSMEIFRPQNNESQVENTLKGKIRIATRCLWLDKGKLLDALHKAAHAALSSCPVNCPLAHMERTVSELLRKLVRKYSGKRPEVIAIAVENPAAVLADEVKARLSGKSHMGFEMPSLRKALDGRKEEKKSSKIPIKGDDGADVEGLLPEDDIPTPSGAEGDFADSEDSDGFWKSFITPSTTEKSIKATNGYIPRKQQESQPTKDDSEDSEEGKSEPKPSKTVKRNKWKPEEVKKLIDMRGELNERFQVVKGRMVLWEEISQKLLADGINRSPGQCKSVWTSLIQTYEEIKNGKSSNKSWPYLEDMDRMMSDNEALAAK 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2387 863 MobiDBLite consensus disorder prediction 41 57 - -
Alju06g2387 863 PANTHER RIBONUCLEASE J 1 863 - -
Alju06g2387 863 SUPERFAMILY Metallo-hydrolase/oxidoreductase 77 491 IPR036866 -
Alju06g2387 863 SMART sant 768 830 IPR001005 -
Alju06g2387 863 Gene3D - 772 833 - -
Alju06g2387 863 Gene3D - 278 428 IPR042173 -
Alju06g2387 863 ProSiteProfiles Myb-like domain profile. 764 828 IPR001005 -
Alju06g2387 863 MobiDBLite consensus disorder prediction 38 57 - -
Alju06g2387 863 MobiDBLite consensus disorder prediction 717 742 - -
Alju06g2387 863 Pfam Metallo-beta-lactamase superfamily 90 235 IPR001279 -
Alju06g2387 863 CDD GT1 770 835 - -
Alju06g2387 863 MobiDBLite consensus disorder prediction 743 774 - -
Alju06g2387 863 Gene3D - 81 493 IPR036866 -
Alju06g2387 863 MobiDBLite consensus disorder prediction 660 774 - -
Alju06g2387 863 MobiDBLite consensus disorder prediction 663 688 - -
Alju06g2387 863 Pfam Myb/SANT-like DNA-binding domain 769 853 IPR044822 -
Alju06g2387 863 CDD RNaseJ_MBL-fold 80 491 - -
Alju06g2387 863 SMART Lactamase_B_5a 89 286 IPR001279 -
Alju06g2387 863 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 434 471 IPR011108 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2387 771 855 Trihelix Transcription Factor Family AT2G38250 34.483 1.85e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju06g2387 Lactamase_B 2.4e-11 CL0381