Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2379 ATGTTGGCCGTGACAGAAGAAACCGGGAGGTTGCCGTCGTCGACAATGGACCTCCTGATAAAGTCTACCTCCGCCGCACATTTCTCTGGTCGGCGTCCTTCAATGACGACGTCGTCTTCTTCATTGTTATCTCCGACTGATGACGGCCTCATTTGCCGGACGCAGCCATTTGTGATCGGGGTCTCTGGAGGTACGGCATCAGGCAAGACCTCTGTGTGTGATATGATCATTCAACAATTGCAAGATCATAGAGTGGTGTTAGTCTGTCAGGACGCATTCTACCGTGGTTTAACAGAAGAAGAGTTGAAACGCGTCCATGAATATAATTTTGATCATCCTGACGCCTTTGATACAGAGGAACTTGTAGAGTGTATCAGCAAGCTAAAATCTGGACAGTCTGTTCATGTGCCGGTATATGATTTTACGACACATCAGCGGTCGTCTGAAAAATATATGCAGGTCAATGCATCTGAGGCAATCATTTTGGAGGGCATACTGGTTTTTCATGAGAAACGTGTCCGCGACATGATGAATATGAAAATCTTTGTTGATACAGATGCTGATGTAAGGCTTGCCCGCAGAATAAGACGTGATACCGTTGACAGGGGTAGAGATGTACAGTCGTATTCAAAATTTGTTAAGCCTGCCTTTGATGATTTCATTCTTCCAACAAAAAAATATGCCGATATCATAATACCTCGTGGGAAAGAGAATGTGGTAGCAGTAGACTTGATTGTTCAACATATCCGCACTAAGCAAGGCCAACATAACCTCTGCAAAGTATATCCGAATTTGAATGTTATCCAATCTACGTATCAGATTAGAGGCATGCACACTCTAATTCGTGACAAGAATATATCAAAGCACGATTTTGTTTTTTATTCAGATCGGCTTATTCGTTTGGTAGTGGAACACGGTCTAGGCCATTTGCCATTTACCGAAAAGCAAGTTATTACACCTACTGGATCAATTTACACTGGAGTTGATTTCTGTAAGAAATTGTGCGGCGTATCCGTCATTCGAAGTGGGGAAAGCATGGAGAATGCTTTGCGTGCATGTTGTAAAGGAATTAAAATAGGAAAAATTCTCATCCACCGTGAAGGTGATGAGACCCAGCTTATTTATGAGAAGCTGCCGAAAGATATTTCAAAGAGGCATGTTCTCCTTTTGGACCCGGTGCTTGGTGCAGGTAACTCAGCCAGCCAAGCCATTGAACTTCTCATACGAAATGGAGTTCCAGAGTCCCACATAATATTCCTCAACCTCATCTCTGCTCCTGAGGGAATACACCGTGTATGCAAACGTTTTCCATGCCTGAAAATCGTCACTTCGGAGATTGAAGTTGGACTAAATGAAGAGTTTCGAGTTATACCAGGGTTGGGAGAATTTGGGGACCGCTATTTCGCAGAAGCTGAGCCTAAAGCAAACATGACCAAGCAAAGCTGA 1446 0.4364 MLAVTEETGRLPSSTMDLLIKSTSAAHFSGRRPSMTTSSSSLLSPTDDGLICRTQPFVIGVSGGTASGKTSVCDMIIQQLQDHRVVLVCQDAFYRGLTEEELKRVHEYNFDHPDAFDTEELVECISKLKSGQSVHVPVYDFTTHQRSSEKYMQVNASEAIILEGILVFHEKRVRDMMNMKIFVDTDADVRLARRIRRDTVDRGRDVQSYSKFVKPAFDDFILPTKKYADIIIPRGKENVVAVDLIVQHIRTKQGQHNLCKVYPNLNVIQSTYQIRGMHTLIRDKNISKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSIYTGVDFCKKLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDETQLIYEKLPKDISKRHVLLLDPVLGAGNSASQAIELLIRNGVPESHIIFLNLISAPEGIHRVCKRFPCLKIVTSEIEVGLNEEFRVIPGLGEFGDRYFAEAEPKANMTKQS 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2379 481 SUPERFAMILY PRTase-like 256 468 IPR029057 -
Alju06g2379 481 Gene3D - 255 469 IPR029057 -
Alju06g2379 481 PANTHER URIDINE KINASE 45 381 - -
Alju06g2379 481 FunFam Uridine kinase 256 470 - -
Alju06g2379 481 Pfam Phosphoribulokinase / Uridine kinase family 58 240 IPR006083 GO:0005524|GO:0016301
Alju06g2379 481 CDD UMPK 58 252 IPR000764 -
Alju06g2379 481 FunFam Uridine kinase 53 255 - -
Alju06g2379 481 CDD PRTases_typeI 329 443 IPR000836 -
Alju06g2379 481 Pfam Uracil phosphoribosyltransferase 270 468 - -
Alju06g2379 481 NCBIfam uridine kinase 57 251 IPR000764 -
Alju06g2379 481 PRINTS Uridine kinase signature 188 198 - -
Alju06g2379 481 PRINTS Uridine kinase signature 56 73 - -
Alju06g2379 481 PRINTS Uridine kinase signature 86 97 - -
Alju06g2379 481 PRINTS Uridine kinase signature 202 213 - -
Alju06g2379 481 PRINTS Uridine kinase signature 131 146 - -
Alju06g2379 481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 54 245 IPR027417 -
Alju06g2379 481 Gene3D - 52 254 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2379 Alju-ChrAlju06 50540582 50547349 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2379 13 472 PRT Gene Family AT3G27190 74.583 0.0 722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2379 06 50540582 50547349 Alju06g2379 06 50540582 50547349 ECH