Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2377 ATGAGTTCTAACTTACGCGAGAGGAGAAAACCAAAGGAACCAGAAGGGAGAAGCATGGTTTCAACGAGACGAAGTGGATCTCTCTCTGGCAACAATTCCAAAAGATCTTCTTCTTCGGATGATAATCCTCCCTCACCGAAGCGTCAAAAGGCTGAAAATGGTGGTCCGTCGGAGAAACCGAAGCCGGCAGCGGAGAATTCTAAAGAAGTAAGCACCCCTGAGCCGGCGGCTGATCCTGGAGAATGCGATGCTCAGATCGCTGGAGATGGCACTGTTGATGGTCTGACTTCTGGCAAGGGTGATACTGCGGCGGCTGTCGCGGTGGCGCTGCCGATCGGTGATGGGTCTTCGCCGACTTTGGTGGTTGACAAGCCACGGGGTTCTTTGTCGTCTTGGAATATTTATCAGAAGCAAAGTCTAAGTTCTGATACCTCGGCGCCTTGGTGTAGGCTCCTGTCGCAGTTTGCCCTGAACCCAAATGTTTCCATTTGCACACCCAACTTCACTATTGGGTCCAGTAGAAATTGCAACTTCCCCCTGAAGGATCAGACTATAAGTGGAAATCTATGCAAGATTAAGCATACACAGCGTGAGGGGTGTGCTGTAGCCTTGCTAGAGAGTACGGGTAGCAAAGGATCCGTGCTAGTTAATGGGGCACTTGTCAAGAAGAACACCAACTGTGTGCTTAACTCGGGTGATGAAGTGGTCTTTGGTTTGCTGGGAAATCATTCTTATATCTTTCAGCAGCTAAATGCTGACGTTGCAGTTAAGGGTGCAGAAATTCAGGGTGGTGTAGGGAAATTTCTGCAGCTTGAAAGGAGAACGGGAGACCCCTCAGCTGTGGCCGGGGCTTCTATTTTGGCTTCTCTTTCAAACTTCAGACAAGATCTCCCGAGATGGAAATCTCTGTCTCAGAATACAAATAAAGCTCATCAGGGCACTGATGTCTCTGCCCATTCTGCTCATCATGATAATACAGAAATTGAGCTTGATGGTCCGGAAGGCAACTCAGCTCCAAATGTAGAGAGTGACAAAGCAGCTGACGTTGGAGCAAGTGACAAGAATCATCCAATGGAATGCGATCCAGATGCTAGCACGGAGGCAGGCAATGTAGTGGAAGAAAGAAATGGGACGAGGGATATGCTGGCAGCCTCAACCTCGGGCATGTCTGTGCGCTGTGCGGTGTTCAAAGATGATGTTTGCGATGCAATATTGGATGGAAAAGACATAGAAGTGTCATTTGACAATTTCCCCTATTATTTAAGTGAGAACACAAAAAATGTCTTGGTTGCAGCTTGCTTTATTCACTTGAAACACAAGGAACATGCAAAATACACATCAGATCTCACAACTATCAACCCACGCATTTTACTTTCTGGACCTGCAGGGTCAGAAATATATCAGGAGATGCTGGCAAAAGCCCTTGCTAATTACTTTGGAGCTAAGTTGCTCATATTTGATAGCCATTTGCTTTTGGATGGTTTATCAACCAAGGAAGCAGAGATACTCAGAGATGGAATTGTTGATGAAAAAAACTTCAACTGCTTCAAGCAAAGTTCTACAGCCACTGACTTGGCTAGGAACATGGACCCATCAATTAGTGAAACAGATACGCCTAGCCCTTCAAACGCACCTGCTTCACATGGCCTTGAATCTCAACCCAAAACTGAGACTGATGCCACGCCTTCCACTTCTGGGGCAACTAAAAATTGTTTGTTTAAAATAGGTGACAGGGTGAAATACAGTTGCTCATCTTCTGGTGGCTTGTATCAGACATGTTCAAGGGGCCCACCTAATGGAAGTCGAGGGAAGGTTGTCTTATGTTTTGATGATAACCCTTCGTCCAAAATTGGTGTAAGATTTGATAAGCCCATACCTGACGGAGTTGATCTTGGAGGTGCCTGTGAGGGGGGTCAAGGATTTTTCTGCAACGTTAGCGATCTTCGATTGGAAAACAGTGTTGTGGACGAGTTAGACAAATTACTTATCAATACATTATTTGAGGTTGTTCATAGTGAGAGCAGAACTGCACCTTTCATTTTGTTTATGAAAGATGCTGAGAAGTCTATTGTGGGAAATGGAGATGCATATTCATTTAAAAGTAAGCTTGAAAAGCTTCCAGACAATGTTGTTGTTATAGGCTCGCATACTCACACTGACAGTCGGAAGGAGAAGTCACATCCGGGGGGTTTGCTTTTTACGAAATTTGGCAGCAACCAGACTGCCCTTCTTGACTTGGCTTTCCCGGATAGTTTTGGAAGATTGCATGAGAGGGGGAAGGAAGTCCCAAAGCCAAACAAAACTTTGACTAAGCTTTTCCCTAATAAAGTTGCAATTCACATGCCACAGGATGAGGCACTTCTAGCATCCTGGAAGCAGCTACTGGATCGAGATGCCGAGACTCTGAAAATCAAAGCAAATTTGCATCACATGCGCACGGTTTTGAGTCGTTGTGGGGTGGAATGTGAAGGACTTGAGACTTTGTGCATTAAAGACCAGGCACTTACTAATGAAAATGCAGAGAAGATAATTGGCTGGGCTTTGAGCCACCACCTCATGCAGAATCCTGAAGCCGATCCTAATTCAAAGCTTGTATTGTCCGGTGAAAGCATCCAGTATGGAATTGGAGTCTTGCAGGCCATTCAAAATGAGTCCAAGAGCTTGAAGAAGTCTCTGAAGGATGTTGTAACAGAAAATGAGTTTGAAAAGAGGCTGTTGGCTGACGTAATTCCTCCTAGCGACATTGGTGTTACTTTTGATGACATCGGAGCTCTTGAAAATGTCAAGGATACGCTGAAGGAGTTGGTGATGCTTCCTTTGCAAAGGCCGGAGCTTTTTTGCAAGGGGCAATTAACCAAGCCTTGCAAGGGTATCTTATTGTTTGGACCCCCAGGAACAGGAAAGACGATGCTTGCAAAGGCAGTTGCCACTGAAGCTGGTGCTAACTTCATCAACATTTCCATGTCAAGCATTACATCTAAGTGGTTTGGTGAGGGTGAAAAATACGTGAAAGCTGTGTTCTCTCTGGCCAGTAAAATTGCTCCTAGCGTTATATTTGTTGATGAAGTTGACAGCATGTTGGGCAGGAGGGAAAATCCAGGGGAGCATGAGGCCATGCGCAAGATGAAAAATGAATTCATGGTGAACTGGGATGGCTTACGTACAAAGGACACCGAGCGAATTCTTGTACTTGCAGCCACTAATAGGCCTTTTGACCTTGACGAGGCTGTCATCCGGAGGCTACCACGAAGATTGATGGTAAATTTGCCAGATGCTCCGAATAGAGCGAAAATATTGAAAGTCATACTAGCTAAAGAGGACTTATCTCCTGATGTTGACTTGGATGCAGTTGCCAATATGACTGATGGATATTCTGGAAGTGATCTGAAGAACCTTTGTGTGACTGCTGCACATCGTCCAATTAAAGAGATATTAGAGAAGGAAAAAAAGGAGCGTGCTGCTGCTCTAGCTGAAGGCAGGCCTCCTCCAGCATTAAGTGGCAGTGCTGATATCCGGTCTTTAAACATGGAGGATTTTAAAGATGCTCATGAACGGGTATGTGCAAGTGTTTCTTCTGAATCCGTAAATATGACTGAGCTATTACAATGGAATGAACTATATGGCGAAGGTGGTTCGAGAAGAAAGAAAGCACTCAGCTATTTCATGTGA 3669 0.4516 MSSNLRERRKPKEPEGRSMVSTRRSGSLSGNNSKRSSSSDDNPPSPKRQKAENGGPSEKPKPAAENSKEVSTPEPAADPGECDAQIAGDGTVDGLTSGKGDTAAAVAVALPIGDGSSPTLVVDKPRGSLSSWNIYQKQSLSSDTSAPWCRLLSQFALNPNVSICTPNFTIGSSRNCNFPLKDQTISGNLCKIKHTQREGCAVALLESTGSKGSVLVNGALVKKNTNCVLNSGDEVVFGLLGNHSYIFQQLNADVAVKGAEIQGGVGKFLQLERRTGDPSAVAGASILASLSNFRQDLPRWKSLSQNTNKAHQGTDVSAHSAHHDNTEIELDGPEGNSAPNVESDKAADVGASDKNHPMECDPDASTEAGNVVEERNGTRDMLAASTSGMSVRCAVFKDDVCDAILDGKDIEVSFDNFPYYLSENTKNVLVAACFIHLKHKEHAKYTSDLTTINPRILLSGPAGSEIYQEMLAKALANYFGAKLLIFDSHLLLDGLSTKEAEILRDGIVDEKNFNCFKQSSTATDLARNMDPSISETDTPSPSNAPASHGLESQPKTETDATPSTSGATKNCLFKIGDRVKYSCSSSGGLYQTCSRGPPNGSRGKVVLCFDDNPSSKIGVRFDKPIPDGVDLGGACEGGQGFFCNVSDLRLENSVVDELDKLLINTLFEVVHSESRTAPFILFMKDAEKSIVGNGDAYSFKSKLEKLPDNVVVIGSHTHTDSRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHERGKEVPKPNKTLTKLFPNKVAIHMPQDEALLASWKQLLDRDAETLKIKANLHHMRTVLSRCGVECEGLETLCIKDQALTNENAEKIIGWALSHHLMQNPEADPNSKLVLSGESIQYGIGVLQAIQNESKSLKKSLKDVVTENEFEKRLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSPDVDLDAVANMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKERAAALAEGRPPPALSGSADIRSLNMEDFKDAHERVCASVSSESVNMTELLQWNELYGEGGSRRKKALSYFM 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2377 1222 SUPERFAMILY SMAD/FHA domain 130 243 IPR008984 GO:0005515
Alju06g2377 1222 MobiDBLite consensus disorder prediction 347 361 - -
Alju06g2377 1222 MobiDBLite consensus disorder prediction 304 375 - -
Alju06g2377 1222 Pfam ATPase family associated with various cellular activities (AAA) 958 1087 IPR003959 GO:0005524|GO:0016887
Alju06g2377 1222 CDD FHA 168 248 - -
Alju06g2377 1222 SMART AAA_5 954 1091 IPR003593 GO:0016887
Alju06g2377 1222 MobiDBLite consensus disorder prediction 316 330 - -
Alju06g2377 1222 CDD RecA-like_ATAD1 921 1087 - -
Alju06g2377 1222 Gene3D - 1090 1184 - -
Alju06g2377 1222 Gene3D - 147 256 - -
Alju06g2377 1222 MobiDBLite consensus disorder prediction 1 19 - -
Alju06g2377 1222 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 396 1221 - -
Alju06g2377 1222 MobiDBLite consensus disorder prediction 1 95 - -
Alju06g2377 1222 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 917 1198 IPR027417 -
Alju06g2377 1222 MobiDBLite consensus disorder prediction 20 44 - -
Alju06g2377 1222 Pfam AAA+ lid domain 1111 1146 IPR041569 -
Alju06g2377 1222 Pfam FHA domain 169 238 IPR000253 GO:0005515
Alju06g2377 1222 ProSitePatterns AAA-protein family signature. 1061 1080 IPR003960 GO:0005524|GO:0016887
Alju06g2377 1222 Gene3D - 916 1197 IPR027417 -
Alju06g2377 1222 Coils Coil 878 898 - -
Alju06g2377 1222 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 916 1092 - -
Alju06g2377 1222 MobiDBLite consensus disorder prediction 526 565 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2377 Alju-ChrAlju06 50517159 50530290 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2377 917 1169 Calmodulin-binding Proteins AT3G56690 39.615 2.78e-41 163