Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2376 ATGGATGGGGGATCCCCCGCCTCCATTCACCAAGCAAAGGAATTATATACATCAGAAATGGCAGTCACATTGGGTAATGTTAACTCTGCTTCTGGCTTGAAAAAGCTTGACGAATACCTTCTCACCCGCAGTTATATAACTGGGTATCAAGCTTCAAAGGACGATATTACAGTATATGCAGCCTTGTCTCAGGCGCCATCGGCTGAATATGTGAACGCTTCCCGGTGGTACAAGCACATCGATGGTCTTTTGAGAATCTCTGGTGTATCTGGTGATGGATCTGGAGTCAAAGTGGAGGGATCTCTTCCTGTAGCAGACGAGACCATTGCCACTCCTCCACCTGCTGACACAAAGGCCACATCCGCTGACGACGACGACGATGATGTGGATTTATTTGGTGAAGAGACAGAAGAAGAGAAGAAGGCTGCTGAAGAACGGGCAGCTGCCGTGAAGGCATCTTCAAAGAAGAAAGAATCTGGGAAGTCGTCTGTTTTGCTGGATGTGAAGCCCTGGGATGATGAGACAGACATGAAGAAGCTCGAGGAAGTAGTGAGAGGGGTTCAGATGGAAGGATTGCATTGGGGTGCTTCCAAACTTGTCCCTGTTGGGTATGGCATTAAGAAGATGCAAATTATGCTTACTATTGTCGATGACCTGGTTTCTGTTGACAACCTCATTGAGGAACGTCTCATGAGCGAGCCAATTAATGAATATGTCCAGAGCTGTGACATTGTGGCCTTCAACAAAATATAATCTGGGATTCGATTCTATAGACTGGGATGTCCTGCCAACGCCTGGGAAGTTTCTAGTGCTATTTTCGTATTATGA 828 0.465 MDGGSPASIHQAKELYTSEMAVTLGNVNSASGLKKLDEYLLTRSYITGYQASKDDITVYAALSQAPSAEYVNASRWYKHIDGLLRISGVSGDGSGVKVEGSLPVADETIATPPPADTKATSADDDDDDVDLFGEETEEEKKAAEERAAAVKASSKKKESGKSSVLLDVKPWDDETDMKKLEEVVRGVQMEGLHWGASKLVPVGYGIKKMQIMLTIVDDLVSVDNLIEERLMSEPINEYVQSCDIVAFNKIXSGIRFYRLGCPANAWEVSSAIFVL 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2376 275 Coils Coil 133 153 - -
Alju06g2376 275 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 239 250 IPR001326 GO:0003746|GO:0005853|GO:0006414
Alju06g2376 275 Gene3D - 154 250 IPR014717 -
Alju06g2376 275 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 27 250 - -
Alju06g2376 275 SUPERFAMILY GST C-terminal domain-like 27 86 IPR036282 -
Alju06g2376 275 FunFam Elongation factor 1-delta 1 22 97 - -
Alju06g2376 275 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 125 133 IPR001326 GO:0003746|GO:0005853|GO:0006414
Alju06g2376 275 FunFam Elongation factor 1-beta 1 like 155 250 - -
Alju06g2376 275 Gene3D - 12 94 - -
Alju06g2376 275 SUPERFAMILY eEF-1beta-like 158 250 IPR036219 -
Alju06g2376 275 SMART EF1_GNE_2 161 250 IPR014038 GO:0003746|GO:0006414
Alju06g2376 275 Pfam EF-1 guanine nucleotide exchange domain 163 250 IPR014038 GO:0003746|GO:0006414
Alju06g2376 275 CDD EF1B 164 250 IPR014038 GO:0003746|GO:0006414
Alju06g2376 275 MobiDBLite consensus disorder prediction 96 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2376 Alju-ChrAlju06 50495131 50497929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2376 26 250 Eukaryotic Initiation Factors Gene Family AT2G18110 77.876 1.08e-113 325