Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2355 ATGATCAAATCATTGTATAAGTCTTGCAGAGTTGCTGTCAACCGATCGCTCCCTTCATCATCCATCAACGAATACAATCAATCACCAATGGAGAATCACCATCTCCAGCACCAGAACCAGCACCAGCTCGAGCAAGCCCCACCCTCCTCCGTATACCTACCTCAGCCCCCTGCTCCTCCTCCTCCTCCTCCTTCTTCCTTCCACCACCTCCTTCATCAGCAGCAACAGCATCTTCTCAATTTCTGGTCGGCCCAGCGCCAAGAGATCGATCATGTCAACGATTTCAAGAACCACCAGCTCCCTCTCGCTCGCATCAAGAAGATCATGAAGGCCGATGAGGACGTTCGCATGATCTCCGCCGAAGCCCCCATTTTGTTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACAATTCGATCTTGGATCCACGCCGAAGAGAACAAGAGGCGCACTCTCCAGAAGAACGACATCGCCGCGGCAATTACTCGCACTGATATTTTCGATTTCTTGGTTGATATTGTGCCTAGGGATGAGATCAAGGACGAGGCTGCCCTTGGTGGAATGATGGCGGCCCCAGCGAGTGGTGTTCCTTACTACTATCCGTCTATGGGCCAACCTGCCCCACCTCCCGGTGGCATGATGATTGGCCGGCCGGCGCTGGATCCCACCGGAGTGTACGCGCAACCGCCTTCGCAAGCGTGGCAGTCAGTGTGGCAGACGGCGACGGATGATGGGTCCTTCGGCAGCGGCGGGAGCAGTGGACAGGGCAATCTTGATGGTCAGAGTTGA 792 0.5543 MIKSLYKSCRVAVNRSLPSSSINEYNQSPMENHHLQHQNQHQLEQAPPSSVYLPQPPAPPPPPPSSFHHLLHQQQQHLLNFWSAQRQEIDHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWIHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAALGGMMAAPASGVPYYYPSMGQPAPPPGGMMIGRPALDPTGVYAQPPSQAWQSVWQTATDDGSFGSGGSSGQGNLDGQS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2355 263 MobiDBLite consensus disorder prediction 229 263 - -
Alju06g2355 263 MobiDBLite consensus disorder prediction 34 68 - -
Alju06g2355 263 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 99 162 IPR003958 -
Alju06g2355 263 Gene3D Histone, subunit A 66 177 IPR009072 GO:0046982
Alju06g2355 263 MobiDBLite consensus disorder prediction 225 263 - -
Alju06g2355 263 MobiDBLite consensus disorder prediction 50 67 - -
Alju06g2355 263 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 62 190 - -
Alju06g2355 263 MobiDBLite consensus disorder prediction 34 49 - -
Alju06g2355 263 FunFam Nuclear transcription factor Y subunit gamma 68 177 - -
Alju06g2355 263 SUPERFAMILY Histone-fold 55 171 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2355 Alju-ChrAlju06 50227727 50236784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2355 65 263 CCAAT-HAP5 Transcription Factor Family AT3G48590 85.366 4.04e-108 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Alju06g2355 CBFD_NFYB_HMF 4.2e-17 CL0012