Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2329 ATGGGTTGCGTGCTCACAACGCCGGCGGATGGCGGAGGCCGGCGCTCGGATTCCGGACCTCAGAATCACCGTCGTCGCGTTAGTCAGGGACATTCTGTCACTGATGGAGGTAATGCCGTTGTTGTTAGGAAGGAAGGGGCGGTGAGGGAGAAGGAGAAGCAGGGGACTCGGCACACCGGCGATTTCCTCGGGACTGTTCCGGCTCCGGAGAGACGGAAGCTTAAGCTTGATCCATGCGCTAAAACCGAGCGTGGTTGGCCGTCGTGGTTGATGGATGTGGCTGGCGATGCTATCCGAGATTGGTCTCCTCGTCGCGCCAGCTCGTTCGAGAAGCTTGCCAAGATTGGGCAAGGGACTTACAGCAATGTATATAAAGCTAGGGACCTTGTTACCGGAAAGATAGTGGCACTAAAGAAAGTTAGGTTTGATAATATGGAGCCAGAGAGTGTGAAGTTCATGGCAAGAGAAATTATTCTGTTGAGGCGGCTTGATCATCCCAATGTCTTGAAACTTGAAGGTTTGGTTACTTCAAGAATGTCATGCAGTCTATACTTAGTATTCGAGTATATGGAACACGATCTCGCTGGGCTTGCAGCTCGCCAAGGTGTTAAGTTTACCGAGCCTCAGGTGAAATGCTATATGAAACAATTACTCTCTGGCCTTGAGCATTGCCACAGTCGAGGTGTTTTGCACCGTGATATCAAGGGTTCCAATCTGCTCATTGATAATGAAGGAATCCTTAAAATAGCGGATTTTGGCCTAGCCACTTTCTATGATCCTGAGAAAAAGCTGCCCATGACAAGTAGAGTTGTCACCCTTTGGTACCGGCCTCCTGAGCTTCTTCTTGGGGCTACAGTATATGGTGTTGGTGTTGACCTTTGGAGTGCTGGCTGCATCTTGGCTGAGCTGCTTGCTGGCAAGCCAATCATGCCTGGCCGAACAGAGGTTGAGCAACTGCACAAAATATTTAAATTATGTGGCTCTCCATCTGAGGAATATTGGAAGAAGTATAGATTGCCAAATGCTACACTCTTTAAGCCGCAGCAGCCTTATAAACGTTGCCTTTCAGAAACCTTCAAAGATTTCCCGCCTCCTTCTTTACCTCTAATAGAAACTCTTCTTGCAATAGATCCAGATGATCGCAGCACCGCCTCATCTGCTCTAAGTAGTGAATTCTTTGCAACTGAGCCCCATGCTTGTGAACCATCAAGTTTACCGAAGTATCCTCCCAGCAAAGAGTTGGATGTAAAACTGAGAGATGAAGAAGCAAGAAGGCAAAAAGCCCAAAGTGGGAAAACTAATGCTGTTGATAGTGCTCGAAGAGTCAAAACACGTGATCGTGGTCGGGCCATTCCAGCTCCAGATGCCAATGCAGAGTTGCAAACAAACATAGATAAGTGGAGAGCTGTGACTCATGCAAATGCAAAAAGCAAGAGTGAGAAATTTCCACCTCCACATCAGGATGGAGCTGTTGGATATCCATTAGATTCATCCCATAAAGGACCTGTGTCCTTTGGTGCCACTGATTCTTCCTTCGGCTCAGCAATATTTAATTCAAAAGTATCAGGATCTGATAAAAATCATGCTGTTACAAGGCCTCGCAGCCACAAAGGGAGGAAAACTAATAAAGCAGATTCCCAGATGGCGTCATCATGGAAATATATGCGAGCCTTCAAACCTACATCAATAGGCCCATCAATGAACTTATTATTTCGGAGCAAATAA 1725 0.4696 MGCVLTTPADGGGRRSDSGPQNHRRRVSQGHSVTDGGNAVVVRKEGAVREKEKQGTRHTGDFLGTVPAPERRKLKLDPCAKTERGWPSWLMDVAGDAIRDWSPRRASSFEKLAKIGQGTYSNVYKARDLVTGKIVALKKVRFDNMEPESVKFMAREIILLRRLDHPNVLKLEGLVTSRMSCSLYLVFEYMEHDLAGLAARQGVKFTEPQVKCYMKQLLSGLEHCHSRGVLHRDIKGSNLLIDNEGILKIADFGLATFYDPEKKLPMTSRVVTLWYRPPELLLGATVYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKYRLPNATLFKPQQPYKRCLSETFKDFPPPSLPLIETLLAIDPDDRSTASSALSSEFFATEPHACEPSSLPKYPPSKELDVKLRDEEARRQKAQSGKTNAVDSARRVKTRDRGRAIPAPDANAELQTNIDKWRAVTHANAKSKSEKFPPPHQDGAVGYPLDSSHKGPVSFGATDSSFGSAIFNSKVSGSDKNHAVTRPRSHKGRKTNKADSQMASSWKYMRAFKPTSIGPSMNLLFRSK 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2329 574 SMART serkin_6 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2329 574 Gene3D Transferase(Phosphotransferase) domain 1 192 433 - -
Alju06g2329 574 ProSiteProfiles Protein kinase domain profile. 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2329 574 Pfam Protein kinase domain 109 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2329 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Alju06g2329 574 MobiDBLite consensus disorder prediction 518 549 - -
Alju06g2329 574 SUPERFAMILY Protein kinase-like (PK-like) 104 397 IPR011009 -
Alju06g2329 574 PANTHER CELL DIVISION PROTEIN KINASE 107 397 - -
Alju06g2329 574 ProSitePatterns Protein kinases ATP-binding region signature. 115 138 IPR017441 GO:0005524
Alju06g2329 574 CDD STKc_CDK9_like 109 393 - -
Alju06g2329 574 Gene3D Phosphorylase Kinase; domain 1 95 191 - -
Alju06g2329 574 MobiDBLite consensus disorder prediction 473 492 - -
Alju06g2329 574 FunFam probable serine/threonine-protein kinase At1g54610 192 433 - -
Alju06g2329 574 FunFam probable serine/threonine-protein kinase At1g54610 96 191 - -
Alju06g2329 574 MobiDBLite consensus disorder prediction 422 447 - -
Alju06g2329 574 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2329 Alju-ChrAlju06 49870753 49874799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2329 101 429 Core Cell Cycle Gene Families AT5G10270 51.989 2.19e-117 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Alju06g2329 Pkinase 6.6e-69 CL0016