Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2327 ATGGATGATGGCTGCCAGCATGAAAATGGAAGGCATAAGGTGGACTATTACAGAGGAGCACATTCCCCGTGGAATATGGCTCCTCAACATCAAACAAAGGAACCGAATGCTTTAGTTATGAATAAGAAAATTATGTCCATCATAGCTGAAAGGGAAGCTGCTATACGAGAACGAAATGCAGCTTTATCTGAAAAGAATGACGCCTTGGCTGCTCGAGATGAGGCCCTTCGGCAGAGGGATGAAGCACTTGTTCAGAGGGATAATGCCATAATGGAACGAGATAATGCCCTTGCTGCCCTTCAAATCCGGGACAATGCTGTCAACTTCCAACTGGGTAGTGGAATTCAACGTGGATTGAAGCGAATGCACCACTCCTCAAACCATCTTGTTGAAATGGCAGAAGCTGCATACAACACAAAGGATACCACCGTAACTGAGGCCTTCCCAGTGACTGTAATAAATTCTGAAGCTGTTAAACCTCATCAGGCAAAGAGAAAAAAGGAAGACAAGGCAATTTCTTCTAAGGCAATGAAGAGCAAAGGAAAGAAAATGGGTGAGGATTTAAATAGGTCAGCTTCTTCTGAAGGAACTAAAATTAAATCAGAGTGGGATAGACAGGATATTGGCTTGAATTTGGTTACATTTGATGAAACTACCATGCCAGCCCCAGTTTGCACATGCACCGGAGTACCACGGCAGTGCTACAAATGGGGAAATGGCGGGTGGCAGTCATCCTGTTGCACCACTTCCTTGTCAATGTATCCATTGCCACAGCTTCCAAACAAGCGCCATTCTCGAATTGGCGGCCGGAAGATGAGCGGAAGTGTCTTTACAAGACTGCTCAGTAGGGTTGCAGCAGAAGGCCAAGATTTATCTATACCGTTGGATCTCAAGGATTACTGGGCCAGACATGGAACAAATCGCTACATCACAATCAAGTAG 942 0.4522 MDDGCQHENGRHKVDYYRGAHSPWNMAPQHQTKEPNALVMNKKIMSIIAEREAAIRERNAALSEKNDALAARDEALRQRDEALVQRDNAIMERDNALAALQIRDNAVNFQLGSGIQRGLKRMHHSSNHLVEMAEAAYNTKDTTVTEAFPVTVINSEAVKPHQAKRKKEDKAISSKAMKSKGKKMGEDLNRSASSEGTKIKSEWDRQDIGLNLVTFDETTMPAPVCTCTGVPRQCYKWGNGGWQSSCCTTSLSMYPLPQLPNKRHSRIGGRKMSGSVFTRLLSRVAAEGQDLSIPLDLKDYWARHGTNRYITIK 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2327 313 Pfam GAGA binding protein-like family 1 313 IPR010409 -
Alju06g2327 313 SMART GAGA_bind_2 1 313 IPR010409 -
Alju06g2327 313 MobiDBLite consensus disorder prediction 159 189 - -
Alju06g2327 313 PANTHER - 1 313 IPR010409 -
Alju06g2327 313 MobiDBLite consensus disorder prediction 159 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2327 Alju-ChrAlju06 49867293 49868337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2327 1 313 BBR or BPC Transcription factor family AT2G21240 60.317 5.04e-135 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Alju06g2327 GAGA_bind 3.9e-101 No_clan