Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2326 ATGAAAGAATCGGAGATCGATATTCTCAACGTCTCCGTTCAGCTTCTTTCTTCTCTTCTGGATGAGATTCCCACTGTTGTTAACTTTAAAGGTAAATGGTCTCTAATTAGAGCTAAACTGTTCGACCTTCAGACTCAGCTCACTGATTTCTCCTGTGAGTTCCCTAATTACTCGTCCCATTCTCTTTCACTCGAACTACTTCAGTCCATTTCACACACCCTAAATGATGCCGTTTCGCTTGCCAAAGAATGCCAGTCCCCAGACTTGTCCCAGGGAAAGCTTAAGACTCAGAGCGACATTGATTCGGTCCTCGCTAAGCTGGATCGTCATGTTAAAGACTGCGAGATTCTGTTCAGGAGTGGGGTTTTGCAAGACACCGCCGTTTCCAGCGCGTCTAAGAGAGAGGCCGTACGGTCTGAATCCAGGAACTTGATTACTCGTCTGCAAATCGGTTCTGCTGAGTCCAGGAAATCAGCGATGGACTCCTTGTTGGGTTTGCTAGAAGAGGATGATAAGAATGTGATGATAGCTGTGGCGCAGGGTGTGGTTCCAGTGCTTGTCCGCTTACTGGATTCTGCGTCTTACGAGATGAAGGAGAAGACTGTTGCTGCCATATCCAGAGTCTCCATGGTGGATAGTAGCAAGCATGTTTTGATCGCTGAGGGTTTGTTGCTTCTGAATCAATTGGTCCGAGTTCTCGATTCGGGGAGTGGATTTTCCAAACAGAAATCTTGCATAGCCCTCCAGGCTCTAAGTTTTTCCAAAGAGAATGCTAGAGCAATCGGGTCTAGAGGTGGAATCTCGTCACTTTTAGAGATTTGTCAAGCCGGCACTCCTGGTTCCCAAGCTTCAGCAGCAGGGGTTTTAAGAAATCTCTCTGTCTTCCCTGAAATTAGAGAGAATTTTGTAGAAGAAAACACCGTTGTTGTTCTATTGGGTCTCGCCTCATCAGGAACTGCATTAGCGCAAGAAAATGCAATTGGGTGTTTGTCCAATTTAGTTTCTGAAGACGAAAGTTTGAAGCTTTTGTTTTTAAAGGAAGGAGGGATCGAGTGCCTGAAGAATTTATGGGACTCAGCTCCTACAGTTCGGAGTCTTGAAGTCGCAGCTGAGTTGTTGAGTCATCTGGCTTCTAATTTACCGATTGCTGAAGTTCTTGTTTCTGACGGGTTTATACTCCGCCTTGTGGATGTGTTGAATTGTGGAATTCTAGGGGTGAGGACTGCGGCAGCTCGAGCTGTTTATGCTTTGGGGTTGCACAGCACAAAATCGAGGAAGGAGATGGGTGAATGTGGATGTCTGACACCACTGATCAAGATGCTGGATGGCAAAGCTGTAGAAGAGAAAGAAGCAGCCGCAAAAGCATTGTCAGTACTCATGTTGTATGCGGGAAATAGAAAAATTTTCCGAAAGGATGAGAGGGGAATAGCTAGTGCTGTTCAGCTGTTGGATCCTTCAATACAGAATTTGGACAAAAAATATCCTGTTTCAGTGCTGACCTCGCTTGTGCAGTTAAAAAAATGCAGGAAACATATGGTGGCGGCTGGTGCTTGTGTATATACGCAAAAGCTTGTTGAGATGGATGTAGAGGGTGCCAAGAAGCTCTTGGACAGCCTTGGCAGTGGTAAGATATGGGGAGTTTTTGCAAGACCCTAA 1656 0.4571 MKESEIDILNVSVQLLSSLLDEIPTVVNFKGKWSLIRAKLFDLQTQLTDFSCEFPNYSSHSLSLELLQSISHTLNDAVSLAKECQSPDLSQGKLKTQSDIDSVLAKLDRHVKDCEILFRSGVLQDTAVSSASKREAVRSESRNLITRLQIGSAESRKSAMDSLLGLLEEDDKNVMIAVAQGVVPVLVRLLDSASYEMKEKTVAAISRVSMVDSSKHVLIAEGLLLLNQLVRVLDSGSGFSKQKSCIALQALSFSKENARAIGSRGGISSLLEICQAGTPGSQASAAGVLRNLSVFPEIRENFVEENTVVVLLGLASSGTALAQENAIGCLSNLVSEDESLKLLFLKEGGIECLKNLWDSAPTVRSLEVAAELLSHLASNLPIAEVLVSDGFILRLVDVLNCGILGVRTAAARAVYALGLHSTKSRKEMGECGCLTPLIKMLDGKAVEEKEAAAKALSVLMLYAGNRKIFRKDERGIASAVQLLDPSIQNLDKKYPVSVLTSLVQLKKCRKHMVAAGACVYTQKLVEMDVEGAKKLLDSLGSGKIWGVFARP 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2326 551 Gene3D - 362 527 IPR011989 -
Alju06g2326 551 Pfam Armadillo/beta-catenin-like repeat 170 206 IPR000225 GO:0005515
Alju06g2326 551 SUPERFAMILY ARM repeat 143 489 IPR016024 -
Alju06g2326 551 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 7 549 - -
Alju06g2326 551 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 181 223 IPR000225 GO:0005515
Alju06g2326 551 SMART arm_5 379 419 IPR000225 GO:0005515
Alju06g2326 551 SMART arm_5 254 294 IPR000225 GO:0005515
Alju06g2326 551 SMART arm_5 170 210 IPR000225 GO:0005515
Alju06g2326 551 SMART arm_5 421 461 IPR000225 GO:0005515
Alju06g2326 551 SMART arm_5 295 335 IPR000225 GO:0005515
Alju06g2326 551 SMART arm_5 337 378 IPR000225 GO:0005515
Alju06g2326 551 Gene3D - 130 361 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2326 Alju-ChrAlju06 49857015 49858670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2326 126 410 U-box Gene Family AT2G23140 27.083 5.15e-15 76.3