Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2320 ATGCATATTCGTGTAGATCCAAATCTTTATATGAACTTCCTTTTTGATGGAGAAGCAGCTCAGTGTGGTGGTGATGACCTCTCTCGCATCTCTTTCATCGCCATTTCTCAGTCCTGCAACGGAAAAAAGCTAAAAACAGCAATGATAATCAGATACAGGAGAGAGAGAGACTCTGGCCCACCATTTGATTCCTACTCAACAACGCTGCTTTGCTCTCTTCTGCATTTCTGTGAACTCATGAACTGGCCGATATGGTGGAAATGGAGGGCCATGGCCTTGGCCATGTCTATAACGGTGTCGTTTCGTATGGGTGTTTGCTTCGACGACTCTCGTTCTCTTTCTTCGCTTGAAGATGCGATTCTCAGGCTTCCTGGTCAGCCCCAAGTTCGCTTTCGTCAGTTCTCAGGATACGTTGAAGTCGACGATAAGAATGAGAAGGCTTTGTTCTACTATTTGGTTGAATCGGACTCTGGTCCTGATTCCAAGCCTCTTGTTCTCTGGCTTAACGGAGGGCCTGGTTGTTCTTCCTTAGGAGTAGGCGCATTCTCTGAAAATGGGCCTTTCAGACCAAATGGGAAAGTTCTAATTGAAAACAAGTATAGTTGGAACAAAGAAGCAAACGTACTGTATTTGGAGACACCGGTTGGAGTGGGTTTCTCTTATGCCAAAGGAAGTTCCTCCCATTTCACAGTAAACGACGAGGCAACAGCCAGGGATAACCTTGTATTCCTGATACGTTGGTTCAAAAAATTCCCCCGCTACAGGCACAGAGACTTGTTTCTGACAGGGGAAAGTTATGCAGGGCATTATGTTCCTCAACTTGCAAAGCTCATGATTGAGATGAACAAAAAGGAGAAGATATTCAATCTTAAAGGCGTAGCTTTGGGTAATCCACTTCTAGAATATGCCACGGACTTCAATTCAAGGGCTGAGTTCTTCTGGTCTCATGGATTGATATCAGATTCAACGTACAGAATGTTCACTAGAGTGTGTAACTATTCTCGGTACGTTAGTGAATACTATAGAGACTCAGTTTCGCCTCTTTGTTCAAAGGTTATGCACCAAGTAGGGAGAGAAACCAGTAAATTTGTGGATAAGTACGATGTTACCCTTGATGTTTGCATTTCATCAGTGCTTTCACAGTCCAAGGCTATTTGTCCTCAAACTGAACAAGCAAACGAGATGGTAGATGTATGTGTAGATGACAAAGTTACAAATTATTTAAACCAAAAAGACGTACGCGAGGCTCTCCATGCCAGGCTTGTTGGAGTTCGCAAGTGGGATGTCTGCAGCAACATTCTCGACTATGATATGCTCAACCTGGAAGTGCCTACCCTCCCTCTCGTTAGATCACTAATAAAAGGCGGAGTTCAGGTCTTAATTTACAGTGGAGATCAAGATTCTGTTCTTCCTCTGACTGGTAGCCGCACCTTGGTTCAAAAATTGGCAAGGAAATTAGAACTAAATACAACAGTACCTTACAGAGTATGGTTTGCAGGCCTGCAGGTTGGTGGGTGGACTCAAGTTTATGGTAATATCCTCTCATTTGCCACAGTGAGAGGAGCCTCCCATGAAGTCCCTTTCTCACAGCCTGAGAGATCCCTTGTGCTCTTCAAGTCATTCTTGGAAGGCAGGCCTCTACCTGATAGTATCTCTACACAAAGTTGA 1668 0.4418 MHIRVDPNLYMNFLFDGEAAQCGGDDLSRISFIAISQSCNGKKLKTAMIIRYRRERDSGPPFDSYSTTLLCSLLHFCELMNWPIWWKWRAMALAMSITVSFRMGVCFDDSRSLSSLEDAILRLPGQPQVRFRQFSGYVEVDDKNEKALFYYLVESDSGPDSKPLVLWLNGGPGCSSLGVGAFSENGPFRPNGKVLIENKYSWNKEANVLYLETPVGVGFSYAKGSSSHFTVNDEATARDNLVFLIRWFKKFPRYRHRDLFLTGESYAGHYVPQLAKLMIEMNKKEKIFNLKGVALGNPLLEYATDFNSRAEFFWSHGLISDSTYRMFTRVCNYSRYVSEYYRDSVSPLCSKVMHQVGRETSKFVDKYDVTLDVCISSVLSQSKAICPQTEQANEMVDVCVDDKVTNYLNQKDVREALHARLVGVRKWDVCSNILDYDMLNLEVPTLPLVRSLIKGGVQVLIYSGDQDSVLPLTGSRTLVQKLARKLELNTTVPYRVWFAGLQVGGWTQVYGNILSFATVRGASHEVPFSQPERSLVLFKSFLEGRPLPDSISTQS 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2320 555 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 120 531 IPR001563 GO:0004185|GO:0006508
Alju06g2320 555 ProSitePatterns Serine carboxypeptidases, histidine active site. 514 531 IPR033124 GO:0004185
Alju06g2320 555 ProSitePatterns Serine carboxypeptidases, serine active site. 261 268 IPR018202 GO:0004185
Alju06g2320 555 PRINTS Carboxypeptidase C serine protease (S10) family signature 211 221 IPR001563 GO:0004185|GO:0006508
Alju06g2320 555 PRINTS Carboxypeptidase C serine protease (S10) family signature 514 527 IPR001563 GO:0004185|GO:0006508
Alju06g2320 555 PRINTS Carboxypeptidase C serine protease (S10) family signature 247 272 IPR001563 GO:0004185|GO:0006508
Alju06g2320 555 PRINTS Carboxypeptidase C serine protease (S10) family signature 198 210 IPR001563 GO:0004185|GO:0006508
Alju06g2320 555 FunFam Carboxypeptidase 113 548 - -
Alju06g2320 555 SUPERFAMILY alpha/beta-Hydrolases 123 548 IPR029058 -
Alju06g2320 555 FunFam Carboxypeptidase 445 544 - -
Alju06g2320 555 Gene3D alpha/beta hydrolase 115 551 IPR029058 -
Alju06g2320 555 Pfam Serine carboxypeptidase 124 544 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2320 Alju-ChrAlju06 49698679 49701972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2320 407 547 Calmodulin-binding Proteins AT2G22960 29.078 5.56e-17 77.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2320 06 49698679 49701972 Alju06g2320 06 49698679 49701972 ECH