Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2272 ATGGAAGAGTGTGGTGCTTTCATTGATCAGCATGAGGGATACAAAAGTAAACTCTCATCAAGAATTCCTAAAGATGAGGAAGAGGATTTGAAAGATGAAGATGAAGAAGATTTAAAAATTAAAACTATGTTCATACCAAAATCTAAGAAAAGAAAGCAGCCCAGCCTTAATCAGATTGAAGAGATGAAAGAAGAACTGTTAGATGGAGAACAGGGGCAAGGTATTAGCAAGCGTAAGACAAAGACACATCGGAGTTGCAATAGATGGTCAGATGAAAGGTATCAGAAGGCTGAGCAAAGAATGTGGGAGCTATTAAAGGCTGCAGGTGCAAATTTTGCAAACCCAATTTCGCGACATGCTCTGAGAAAGGCTGCCCGTCAGCACATTGGTGATACTGGACTTTTAGACCACTTACTGAAGCAAATTGAAGGTAAAATAGCACCTGGAGGGACAGAACGGTTTCGACGGTGTTACAACCCCCAAGGAATTATGGAGTATTGGTTGGAGAGTGCTCACCTAGATAAAGTCCGTCAGGACGCTGGGGTGCAGGATCCTTATTGGCTGCCACCTTCTGATTTTAGTGCAGGCAATGCCCCCTCTCAGAATACTGATTCTTCTTGTGAACTGAAGTTGCTACAGATAGAAATGGCCAAAATGAAGAGAGATATGCAGGAGCTGATATATAAGAAGCAAGAGAAAAATGAACATAGTCTGATGGAAGTTACACAGAAGGAATTGGTGAAGTTCAAAGCTATGACTGAGGAGCGCTTATCTGTGATTATTACTTCTTTGAAGGGTATGCAGGGCATGTATGATGAATTGGTCACTTGGAAAACTAAAGTTGATCAACAGCTTGCAGAAATAGCCAATAAATTGAACGATCTTCAGTCACCTCAAGAACAAACTAATACGGGTTTGCCCCCAGAAGAATGGGAAGGTTGGCTAGAAAACTTCAACCTGGACAATATTCCAGGAGATGGACTTGTGACTTGGTTAGATGGTACAGAAATGCCAGATGTTAAGCAAGAGGTTGTACACTATGATCCTATCTTACCCTTACCGTCTCCACCATGCTATAAAGAACCAAAAGACGCAAAGAGCAATTTGCTGGAGGTCACTACCAAGAGACAACAGGAAGATCAACCTGATGTGACTCCTTGTTCTTCTATGACTCCTAGTCCAAAATCAGATCTAGACAACAACACATTCATAGTTTTTCAGGGGATGTTGATGGAGTTGTTTAAATGGAAAGATAAAATGGAGCGGCAGCTTTTGGAGGTATCAAATTCTGTACATATGCTGAAGATGAAGTATGGTACAGCCTGA 1326 0.4148 MEECGAFIDQHEGYKSKLSSRIPKDEEEDLKDEDEEDLKIKTMFIPKSKKRKQPSLNQIEEMKEELLDGEQGQGISKRKTKTHRSCNRWSDERYQKAEQRMWELLKAAGANFANPISRHALRKAARQHIGDTGLLDHLLKQIEGKIAPGGTERFRRCYNPQGIMEYWLESAHLDKVRQDAGVQDPYWLPPSDFSAGNAPSQNTDSSCELKLLQIEMAKMKRDMQELIYKKQEKNEHSLMEVTQKELVKFKAMTEERLSVIITSLKGMQGMYDELVTWKTKVDQQLAEIANKLNDLQSPQEQTNTGLPPEEWEGWLENFNLDNIPGDGLVTWLDGTEMPDVKQEVVHYDPILPLPSPPCYKEPKDAKSNLLEVTTKRQQEDQPDVTPCSSMTPSPKSDLDNNTFIVFQGMLMELFKWKDKMERQLLEVSNSVHMLKMKYGTA 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2272 441 MobiDBLite consensus disorder prediction 13 27 - -
Alju06g2272 441 MobiDBLite consensus disorder prediction 13 35 - -
Alju06g2272 441 MobiDBLite consensus disorder prediction 65 84 - -
Alju06g2272 441 MobiDBLite consensus disorder prediction 374 395 - -
Alju06g2272 441 Coils Coil 209 229 - -
Alju06g2272 441 PANTHER PROTEIN DYAD 19 435 IPR044221 GO:0007131|GO:0051177|GO:0051321
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2272 Alju-ChrAlju06 49087368 49089379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2272 88 169 PHD Transcription Factor Family AT5G22260 42.169 4.12e-08 53.5