Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2262 ATGAAGGGGACTCCCGTTGGCTTCCCAGTTTTCTTCGTCTTCCTTCTTCTTTTAGCTTCTGAAGGGATGGCGACGGAAACCCAGGGCATTTTGAGACATCCATGCCAGGTTGCCAGCAAAAGGTTCTCAGGCATATGCGTGAGCGACCACCGCTGCGCCGGCGTCTGCCAATCTGAAGGTCACCCCGGCGGTGAGTGCGAAGGCGTCCGCCGCCGCTGCCTTTGTAAAGTTCCCTGCTGA 240 0.575 MKGTPVGFPVFFVFLLLLASEGMATETQGILRHPCQVASKRFSGICVSDHRCAGVCQSEGHPGGECEGVRRRCLCKVPC 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2262 79 PRINTS Purothionin signature 64 78 IPR008176 GO:0006952
Alju06g2262 79 PRINTS Purothionin signature 34 49 IPR008176 GO:0006952
Alju06g2262 79 Gene3D - 33 79 IPR036574 -
Alju06g2262 79 PANTHER DEFENSIN-LIKE PROTEIN 1 10 76 - -
Alju06g2262 79 Pfam Gamma-thionin family 35 79 - -
Alju06g2262 79 SUPERFAMILY Scorpion toxin-like 34 79 IPR036574 -
Alju06g2262 79 CDD Knot1 44 75 IPR003614 GO:0006952
Alju06g2262 79 SMART gth_4 34 79 IPR003614 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2262 Alju-ChrAlju06 48971208 48971530 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2262 1 79 Plant Defensins Gene Families AT1G61070 37.500 4.52e-14 59.3