Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2256 ATGCAATATGCCATTTCGCTTTCTTCATTTCCTTCTCTCACTTCCAGCTTTCATGGTGGATTCAAGCGTCCAGACCTCAAGCTAGCAGGAAGCAGGAAGTCTTCATCTGAAATTTTCTTGGACATCAAAGAGCCTAATAACAACATGCTTCGCCCAAAATTTATTGGAGATACTCTGAAATTAATGACAAGGTTACTGCTATTCCTCAGTGTCCTGAGACTCAGTTCTGCAACCACAGATCCTGACGTGGAAGGTGAAGCTTTGTTTGAAGTTAGGCAGGCTCTCCATGATCCCACCCATCAATTAGCTGATTGGAATTATTTTTTTGTGTCTGCATGCGTTAGTTGGTCCCATGTCACTTGTAGAAACGGACACGTTATAGCCCTGAGCCTGGCTACTTATGAACTTTCTGGAACAATATCTCCTTCAATAACCAGATTGAAATATTTGTCTAGCTTGGAGTTGCAGAACAACAAATTCTCAGGCCCGTTACCTGATTATATTGCCAATCTGACACAACTTCAATATCTCAATCTTGGAGACAATCATTTTAGTGGTTCTGTTCCAGCTAGCTGGGGCAAACTTCAAAATCTAAAGAACCTGATCTTAAGAGGGAATAATTTATCCGGACCAGTACCAGACACGCTCGCTAATATTAGTGGATTGGCAGAATTGGATCTTTCATCTAATGGTCTAACTGGAGACATTCCAATGCAACTCTTTTCAGTTCCAAGCTTCAACTTTTCAAATACTCAACTTCATTGTGGATCTCATCATTTGGAGAGGCCTTGCGTTTCTACTTCCTCGATCCCAGTTTCCACCAACAAATCAAAAGTTGCAGTTGTTTTGAGTTTTGCTAGTTCTGGTGCATTAGCACTTCTTTGTCTTGGGGCTATCTTTGCATATCGATACCGATACATACAAGGATACGAAGATGAAATCTTCGTTGATGTTTCAGGTGAAGATGAGAGCAAAATTTCTTTGGGACAACTGAGAAGATTTTCCTTGAGAGAGCTACAACTTGCCACTAAGAATTTCAGTGAGAGCAATGTGATTGGCCAGGGAGGCTTTGGAAAAGTTTACAAAGGAGTACTTTCAGATGACACTAAAGTTGCTATAAAACGTCTAGCTGATTACAATAATCCTGGTGGAGAGGCTGCATTCCAAAGAGAAGTTCAACTAATTAGTGTTGCAGTTCACAGGAACCTCCTTCGCCTAATCGGATTCTGCACAACCCCTACTGAGAGAATCCTTGTATACCCTTTCATGGAAAATCTAAGTGTAGCGTATCGCTTGAGAGATTTAAAACCTGGTGAGAAAGGCTTGGACTGGCCAACAAGGAAGCGTGTGGCTTTTGGTACAGCACATGGCTTGGAGTACCTCCATGAGCAATGTATTCCCAAGATCATTCACCGCGATCTAAAAGCCGCAAACATTTTACTAGACAATGACTTTGAAGCTGTACTCGGAGATTTCGGGTTGGCGAAGCTCGTTGACACAAGGCTGACCCATGTCACCACTCAGGTGCGAGGCACAATGGGCCATATCGCCCCAGAATACCTCTCCACCGGAAAATCAACAGAGAAGACTGATGTCTTTGGATACGGCATAACTCTCCTTGAACTCGTCACCGGTCAGCGCGCCATAGACTTGTCGCGGCTTGAAGAGGAGGAGGATGTTCTTCTGCTTGATCATATAAAGAAGCTACTAAGAGAGAACAGGCTAGAGGACATAGTGGATAGGAACCTGGAGGGTTATGATCCAAAAGAAGTGGAAACAATAGTTCAAGTAGCATTGCTTTGCACACAAGGCATGCCAGAGGACAGGCCAAGCATGTCAGAGGTAGTGAATATGCTTCAAGGTGTGGGTTTAGCAGAGAGATGGGCAGAGTGGGAGCAATTAGAAGAGATCAGTAATCAAGAATTCTCGTCACTTTCTCATCACTTTGCTTGGGCTGATGAATCCACTCTTCAAGAGGCTATACAACTTTCCACAGCAAGATAA 2004 0.4326 MQYAISLSSFPSLTSSFHGGFKRPDLKLAGSRKSSSEIFLDIKEPNNNMLRPKFIGDTLKLMTRLLLFLSVLRLSSATTDPDVEGEALFEVRQALHDPTHQLADWNYFFVSACVSWSHVTCRNGHVIALSLATYELSGTISPSITRLKYLSSLELQNNKFSGPLPDYIANLTQLQYLNLGDNHFSGSVPASWGKLQNLKNLILRGNNLSGPVPDTLANISGLAELDLSSNGLTGDIPMQLFSVPSFNFSNTQLHCGSHHLERPCVSTSSIPVSTNKSKVAVVLSFASSGALALLCLGAIFAYRYRYIQGYEDEIFVDVSGEDESKISLGQLRRFSLRELQLATKNFSESNVIGQGGFGKVYKGVLSDDTKVAIKRLADYNNPGGEAAFQREVQLISVAVHRNLLRLIGFCTTPTERILVYPFMENLSVAYRLRDLKPGEKGLDWPTRKRVAFGTAHGLEYLHEQCIPKIIHRDLKAANILLDNDFEAVLGDFGLAKLVDTRLTHVTTQVRGTMGHIAPEYLSTGKSTEKTDVFGYGITLLELVTGQRAIDLSRLEEEEDVLLLDHIKKLLRENRLEDIVDRNLEGYDPKEVETIVQVALLCTQGMPEDRPSMSEVVNMLQGVGLAERWAEWEQLEEISNQEFSSLSHHFAWADESTLQEAIQLSTAR 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2256 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Alju06g2256 667 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 65 630 - -
Alju06g2256 667 SUPERFAMILY Protein kinase-like (PK-like) 324 619 IPR011009 -
Alju06g2256 667 FunFam Somatic embryogenesis receptor-like kinase 1 423 639 - -
Alju06g2256 667 ProSiteProfiles Protein kinase domain profile. 346 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2256 667 FunFam Somatic embryogenesis receptor kinase 1 315 422 - -
Alju06g2256 667 SUPERFAMILY L domain-like 85 296 - -
Alju06g2256 667 SMART serkin_6 346 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2256 667 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 82 240 - -
Alju06g2256 667 Pfam Leucine rich repeat N-terminal domain 83 121 IPR013210 -
Alju06g2256 667 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Alju06g2256 667 Pfam Protein kinase domain 347 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2256 667 Gene3D Ribonuclease Inhibitor 81 266 IPR032675 -
Alju06g2256 667 Gene3D Phosphorylase Kinase; domain 1 315 422 - -
Alju06g2256 667 Gene3D Transferase(Phosphotransferase) domain 1 423 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2256 Alju-ChrAlju06 48906220 48910830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2256 66 662 Receptor kinase-like Gene Family AT5G65240 57.214 0.0 666
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Alju06g2256 Pkinase 3.8e-44 CL0016