Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2235 ATGCCTCTCTTAAAAAGGAAGCCTTTTGTCCTGGCTGAGCCACCTAAAGATTTGGAGCCACATGAGCTTGTCCATCAAGTTCGATTTACAAAAGAAATATTCCGAGATTATCATGATTATTTGAACCGTATAAATTTGTATCGCCAGAGAGTTTGGACATGTAAAGTCACCGGAAAATCTAACTTGACTTATGAAGAGGCTATGGTGTCAGAAAAGCGTGCCACTGAAAAAGTCCAACAAATTCCCAAAGAATTAATGGCTCCTGCACTAAGGATTATTCAATACAGCATGATTCCGTTGAGGGATCTTGCCGATGCAATAGCTGAAAAGTTGCAGGAACAGGTGTATGTGGGTGCTGAGCTGCATGGAAAAAAGGATGATGGAGAACATCCCTGCAAAATATTGAAAGTCGTGCAGGAAGGGGTTGATGAATTCCGTTATGAGGTAGCTTGGCTTGACAAAAACAAGAAAACAATTGAAAAAGCAGAACTCAGTGCCAAGGATTTAGTGCAGAAGAAGTTTCCTTTTAGCAGGAATATCTTGAAATCTTTTATCCGGGAATCTACATATCGTAATGCTCCTTGGGTGATACACGATGAATTGGCACGAAATTATGGAATCTCAACTGATATCCCAGAGGAATTAAAGGGAAGAGCTTTCTTCAACAACGGACTTTTAATTTGCAACAAGAAAAGGAAAAATGAGGATGTAGATGGTGAAGCTGAGAATTGCAAAAAGAGGAAGTCGGATCATGCAAAAAATGGTGGCTCCTCTTCAGTGAAAGAAAATGGCCAATGTAAGGAAGAACCTATCAAATATCCGATTGACGATTTATTGGTGCAGCCTAGTCCAATGGATCCCCTTTTTGCTGATCGTCCTTCTCCATCAAGAGATTTCAATGTTCCAGTTCATTGTGTAGGGGATCTCTTAATGGTTTGGGATTTTTATACTTCTTTTGGTAGGCTGTTGCACTTGTCACCCTACTCTCTGGAAGATTTTGAAAACTCTCTCTGCCACAAGGAAAGCAATGTGGTTCTTCTTGTGGAATCTCATGCAGCACTCTTGCGGGTGCTCATGAAAGACGATGGTGAGTATGCTTCAGCTGTACAGAAGAGAAAACGGAAGTTTAAGATTACAATGATTAATTGGCAAGAATATTTATGCGATTTTCTAGAAATGATCAATGTTCCTGGATTACGGCAGTTCGAAGCTACCATAAAAAGGGGACATTATGGCCTCATTGATATCAATGCTAAGCTAGAAATCTTGTGCGAATTGGTCAATCGAGTTCTTGAAACCTCCATTTTTAGGGAAAAGTTGGACGAGGTTATTGAACAGCGGCAGGCACTTGGTGCTACTAGAAGAGGAGAAGCGCTAGAAGATGGTAGAAAAAGAAGAGAAGAGAAGGAACGGTTGAAAGCTGAGATTGAAAGTAATGGGAGTATGGATGGGCACTGTAAAACAAATGGAGCAAGTGTCTCAACAAAAAATAATCACAGTAGACAGAACGGAGACATAGGAAAGAAAAGAAATGGAGAAAAGGAATCATCTAGGAATGAGGATGCTTTCGGTGGAAGTATGGATAAGCATTCAAATGGTGCATCCAAAAAGTCCTCTAAGAAACTGAGTTTAGAACTGAAAGAACCAGCAGAAAATGGAAATGAATCATCCAGAAAGGAAGTGCAGAAGCAATTAAATGTGGAGAAGGATCCATCAGATAAGAATAGTATAGAACAGAGGAGAGAATATTTTGAGCGAGAGATGGAAAAACGATTTGTTCGTACGAGTCCCCTAGGTAGAGACAGGCATTACAACAGGTATTGGTGGTTTCGCCGTGATGGGAGGATATTTGTAGAAAGTTCTGATTCCAAGGAGTGGGGCTACTACAGCAGCAAGGAAGAGCTTGACGCATTGATGAAGACACTGAATCGGAAGGGTGTGCGGGAAAGAGCATTGCAAAATCAACTGGAAAAATATTATGGTAGAATATGTACGGAACTTCAGAAGAGATCCAAGGAACAGATACAGAAGATTGCAGTAGACGAGTCTGTGCTCCGAAGGTCTACTCGCGTCCGAGCGCCACCTAGAGAAAATCCTGCCAATGCTTTCCTCAAGTATGTTAACAAGTGGAAGGAAGAGTAG 2142 0.4113 MPLLKRKPFVLAEPPKDLEPHELVHQVRFTKEIFRDYHDYLNRINLYRQRVWTCKVTGKSNLTYEEAMVSEKRATEKVQQIPKELMAPALRIIQYSMIPLRDLADAIAEKLQEQVYVGAELHGKKDDGEHPCKILKVVQEGVDEFRYEVAWLDKNKKTIEKAELSAKDLVQKKFPFSRNILKSFIRESTYRNAPWVIHDELARNYGISTDIPEELKGRAFFNNGLLICNKKRKNEDVDGEAENCKKRKSDHAKNGGSSSVKENGQCKEEPIKYPIDDLLVQPSPMDPLFADRPSPSRDFNVPVHCVGDLLMVWDFYTSFGRLLHLSPYSLEDFENSLCHKESNVVLLVESHAALLRVLMKDDGEYASAVQKRKRKFKITMINWQEYLCDFLEMINVPGLRQFEATIKRGHYGLIDINAKLEILCELVNRVLETSIFREKLDEVIEQRQALGATRRGEALEDGRKRREEKERLKAEIESNGSMDGHCKTNGASVSTKNNHSRQNGDIGKKRNGEKESSRNEDAFGGSMDKHSNGASKKSSKKLSLELKEPAENGNESSRKEVQKQLNVEKDPSDKNSIEQRREYFEREMEKRFVRTSPLGRDRHYNRYWWFRRDGRIFVESSDSKEWGYYSSKEELDALMKTLNRKGVRERALQNQLEKYYGRICTELQKRSKEQIQKIAVDESVLRRSTRVRAPPRENPANAFLKYVNKWKEE 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2235 713 MobiDBLite consensus disorder prediction 238 264 - -
Alju06g2235 713 Coils Coil 459 479 - -
Alju06g2235 713 Pfam ATP-utilising chromatin assembly and remodelling N-terminal 24 120 IPR013136 -
Alju06g2235 713 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 593 659 IPR028941 -
Alju06g2235 713 ProSiteProfiles DDT domain profile. 303 364 IPR018501 -
Alju06g2235 713 Coils Coil 152 172 - -
Alju06g2235 713 ProSiteProfiles WAC domain profile. 22 129 IPR013136 -
Alju06g2235 713 PANTHER BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A 1 711 - -
Alju06g2235 713 MobiDBLite consensus disorder prediction 502 525 - -
Alju06g2235 713 MobiDBLite consensus disorder prediction 238 255 - -
Alju06g2235 713 MobiDBLite consensus disorder prediction 482 501 - -
Alju06g2235 713 Pfam DDT domain 304 361 IPR018501 -
Alju06g2235 713 SMART testlast3 303 364 IPR018501 -
Alju06g2235 713 MobiDBLite consensus disorder prediction 454 480 - -
Alju06g2235 713 MobiDBLite consensus disorder prediction 540 578 - -
Alju06g2235 713 MobiDBLite consensus disorder prediction 452 578 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2235 Alju-ChrAlju06 48681705 48687166 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2235 579 658 Homeobox Transcription Factor Family AT5G44180 42.697 1.96e-08 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Alju06g2235 WAC_Acf1_DNA_bd 3.5e-28 No_clan