LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Alju06g2200	ATGGCACACATTGCTTCAACTGCTTCAGCCACATTTTTGGCTCTACAGCGCGGGACAAGGCAACAGAGTAAAATTTTTCCGGGCTTTTCGAGAAGTAGGGGAATTCATTCATTCTTATTTACAAATTCTCCGAGGAAACGGTTGCAAGTACGATTGTTTTCTTCTGGGACAAATCGCAGCAATGGAGATATTGTGGAGATATCTGAGAGTGAAAAGAAACTCAGTAACTATGCTTGGCCTGATACAAGGAAGCCTAGGGTGTGCATATTGGGTGGTGGATTTGGCGGTTTATATACTGCATTAAGGTTGGAGTCACTGGAGTGGTCCGACGACAAAAAGCCACAGGTTCTTCTTGTTGACCAGTGTGAACGTTTTGTTTTCAAGCCCATGTTATACGAGCTTCTATCTGGAGAAGTGGATGAATGGGAAATAGCTCCCCGATTCTCTGATTTGCTGGCAAACACTAGCATCCAATTTTTGCAAGATAGAGTTAAACTTCTGCATCCTTCTGATCACTGGGGAAGGGATGGACCGCCAGCATCTAGTTGTGGAGGAACTGTGCACCTTGAAAGTGGCCTTTCTATAGAATATGACTGGCTGGTTCTTGCTTTGGGAGCTGAAGCCAAACTTGATTTCGTACCAGGAGCAACTCAGTTTGCATTGCCATTCACCACACTAGAGGATGCAATTAAAGTTAATAATAATTTAAAAACATTGGAGAGAAAATACTTTGGAAAGGATTCCCAAATCAGTGTGGCAGTTGTTGGCTGTGGTTACTCTGGAGTTGAGTTAGCTGCTACGGTGGCAGAGAGATTAAAGGACAAAGGGGTTGTTAGAGCAATTGATGCTGAAAACATTATCTGCCCAACTGCCCCGCCTGGCAATAGGGAAGCCGCTCTGAAAGTTCTTTCATCCAGAAAGGTTGAACTTCTATTGGGTTATCTAGTCCGCTGCATTCAGAGGGAGAGTGACTTGGAGTCTTCAGATACCCTGACAGGGGAAGGTGAAAACCAGGGAAATCAAGCTGTACATGATTCTGATAAATATGTTTTGGAGCTGCAACCTACCGAAAGGGGATTACAAAGGAAAGTTCTAGAAGCAGATCTGGTATTGTGGACTGTTGGTTCTAAATCTTCTCTTATTCAGATAGAGCCCTCAGATTTATCTCTTCCACTTCCTCTTAATGGCCGGGGCCAAGCAGAAACAGATGAAACTCTTCGTGTTAAGGGCCACCCACGGATATTTGCTCTTGGTGACTCCTCTGCAATAAGAGATTCACATGGAAGGATCCTTCCGGCCACTGCACAGGTTGCGTTTCAGCAAGCGGACTTTGCTGGTTGGAATCTGTGGGCTGCGATCAATGGCCGTCCACTTTTGCCATTTAGGTTTCAGAATTTGGGTGAGATGATGACACTGGGAAGAAATGATGCTGCCATTTCTCCCAGTTTTATTGAGGGACTGACTTTAGATGGTCAGATTGGTCATACAGCAAGGAAGCTAGCATATTTGCTCAGGTTACCAACAGATGAACATAAGCTTAAAGTGGGAATCAGCTGGTTCACAAAGTCTGCCATTGCTTCAGTGGCTTCACTACAGAGCACCTTAACCAAGGTTCTTTCTGGCTCATAG	1629	0.4469	MAHIASTASATFLALQRGTRQQSKIFPGFSRSRGIHSFLFTNSPRKRLQVRLFSSGTNRSNGDIVEISESEKKLSNYAWPDTRKPRVCILGGGFGGLYTALRLESLEWSDDKKPQVLLVDQCERFVFKPMLYELLSGEVDEWEIAPRFSDLLANTSIQFLQDRVKLLHPSDHWGRDGPPASSCGGTVHLESGLSIEYDWLVLALGAEAKLDFVPGATQFALPFTTLEDAIKVNNNLKTLERKYFGKDSQISVAVVGCGYSGVELAATVAERLKDKGVVRAIDAENIICPTAPPGNREAALKVLSSRKVELLLGYLVRCIQRESDLESSDTLTGEGENQGNQAVHDSDKYVLELQPTERGLQRKVLEADLVLWTVGSKSSLIQIEPSDLSLPLPLNGRGQAETDETLRVKGHPRIFALGDSSAIRDSHGRILPATAQVAFQQADFAGWNLWAAINGRPLLPFRFQNLGEMMTLGRNDAAISPSFIEGLTLDGQIGHTARKLAYLLRLPTDEHKLKVGISWFTKSAIASVASLQSTLTKVLSGS	542

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Alju06g2200	542	Pfam	Pyridine nucleotide-disulphide oxidoreductase	86	442	IPR023753	GO:0016491
	Alju06g2200	542	FunFam	Alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial	82	515	-	-
	Alju06g2200	542	SUPERFAMILY	FAD/NAD(P)-binding domain	81	450	IPR036188	-
	Alju06g2200	542	PANTHER	APOPTOSIS-INDUCING FACTOR 1	19	538	-	-
	Alju06g2200	542	Gene3D	-	82	516	-	-
	Alju06g2200	542	MobiDBLite	consensus disorder prediction	330	344	-	-
	Alju06g2200	542	MobiDBLite	consensus disorder prediction	326	346	-	-
	Alju06g2200	542	PRINTS	FAD-dependent pyridine nucleotide reductase signature	197	215	-	-
	Alju06g2200	542	PRINTS	FAD-dependent pyridine nucleotide reductase signature	87	106	-	-
	Alju06g2200	542	PRINTS	FAD-dependent pyridine nucleotide reductase signature	251	269	-	-
	Alju06g2200	542	PRINTS	Pyridine nucleotide disulphide reductase class-I signature	414	421	-	-
	Alju06g2200	542	PRINTS	Pyridine nucleotide disulphide reductase class-I signature	251	276	-	-
	Alju06g2200	542	PRINTS	Pyridine nucleotide disulphide reductase class-I signature	86	108	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Alju06g2200	60	443	Chloroplast and Mitochondria Gene Families	AT4G21490	23.174	2.04e-07	52.0

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Alju06g2200	06	48294794	48298546	Alju06g2200	06	48294794	48298546	ECH