Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2195 ATGAACGGTGAATTGGAGTTACCTCCTGGGTTCAGATTCCATCCAACGGACGAGGAGCTCGTGAATCACTATCTCTGTACCAAATGTGCCTCTCAGTCCATTGCCGTTCCCATTATCAAAGAGATCGATCTCTACAAGTTTGATCCATGGCAACTTCCTGAAATGGCTCTGTACGGCGAGAAGGAATGGTACTTCTTTTCACCGAGGGACCGAAAATATCCGAACGGTTCGAGGCCGAACCGGGCGGCGGGAAGTGGGTACTGGAAAGCAACCGGAGCCGATAAGCCGATTGGTAAGCCGAAGCCACTGGGAATAAAGAAGGCACTCGTTTTCTACGCCGGTAAGGCCCCCAATGGCATCAAAACGAACTGGATCATGCATGAATATCGCCTCGCTAACGTCGACAGATCCGCCGGCAAGAAAAAAAACCTAAGGCTTGATGATTGGGTGTTATGTCGAATTTACAACAAGAAAGGCACGATTGAGAAATACAATGTGGTGGATCAGAAACCCGGCAAGTTATTGGAATTCCATGACCATGAGACCAAACCGGAAATCAAACCGTACGAGCACAATAAGGTGCAGACACTGGCGGCGGCGGCGTTCACGAATGAACAATTCTACATGGACACGTCGGACTCGGTGCCGAGGCTGCACACGGACTCGAGCTGCTCGGAGCACGTGGTTTCGCCGGACGTCACGTGCGACAAGGAGGTACAGAGCGAGGCCAAGTGGAACGAGCTAGGGCTCGGAGAAGACGATGGGCTTGATTTTGAATTGAATTATATGAATAATCTCTCTGGAGAAGATCCTTTCGGCTCTTCTGTACAGTACCAAATGAACCAGCTCTCGCCATTGCAGGACATGTTCATGTTTCTACAGAAGCCATTTTGA 894 0.5 MNGELELPPGFRFHPTDEELVNHYLCTKCASQSIAVPIIKEIDLYKFDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGKPKPLGIKKALVFYAGKAPNGIKTNWIMHEYRLANVDRSAGKKKNLRLDDWVLCRIYNKKGTIEKYNVVDQKPGKLLEFHDHETKPEIKPYEHNKVQTLAAAAFTNEQFYMDTSDSVPRLHTDSSCSEHVVSPDVTCDKEVQSEAKWNELGLGEDDGLDFELNYMNNLSGEDPFGSSVQYQMNQLSPLQDMFMFLQKPF 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2195 297 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 218 - -
Alju06g2195 297 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Alju06g2195 297 ProSiteProfiles NAC domain profile. 7 157 IPR003441 GO:0003677|GO:0006355
Alju06g2195 297 Gene3D NAC domain 16 162 IPR036093 GO:0003677|GO:0006355
Alju06g2195 297 Pfam No apical meristem (NAM) protein 8 131 IPR003441 GO:0003677|GO:0006355
Alju06g2195 297 FunFam NAC transcription factor 16 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2195 Alju-ChrAlju06 48182064 48183298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2195 1 297 NAC Transcription Factor Family AT1G01720 64.803 1.23e-129 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju06g2195 NAM 4.9e-38 No_clan