Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2175 ATGAAGCTGACCGGAGACGGTATGGCGTCCGAAGAAGGCACGAGCGACTGCGACGGTATTCGGACGGTCGTCGTTGGGGTGAAGTTGGATCCTCGGAGTAGGGAATTGCTCACTTGGGCCCTAGTCAAAGTGGCGGAGCCTGGTGACCATGTCATTGCTCTTCACGTTCTCGGCAGTATACCCGGGGGTACGGGATCGTTCCTCTCTCTTGTAAATACTTTTGAATCTGTTCTCGCCGTTTACGAAGGTTTCTGCAACTTGAAGCAGGTTGATCTGAAGCTGAAAGTCTGTAGAGGTGAGTCGGCTCGGAAACTTATTGTACGGGAGGCGAAATCGTTTGGTGCGTCAACTGTAATTGTGGGGACTTCTAAAACGCATCACACAATCCGGTCATCGGCATCCGTTGCCAAGTATTGTGCGAAAAAATTGCCCAAATGTATCTCTGTCTTTGCGGTTGACAATGGCAAAATTGCGTTCCACAGAGAGGCTACAAAAATATGCGGTGCTCAAGTAAAACTAACTGAAGGCCCAGCTTTGTTAACAAAATCCTTCAAGCCGGGTACAAAGACAAATCTCATGAACTGTGAATGTTGTGAGCGGGTGCTAGCACTTCCAGAGAGTACTGCTATTGAAGATGCGCCTGATGATCAGGAAAAGAAAGATTCACTAGCTTTAGTACCGCTTCAGAAAATTGGCGATGGTCAAGGTTGTGCAACTGTGGTTGAGGAGTCAAACCAGTCTAAACATGGCTGGTCTGTCCTTCGCCAGGTATTTCTGCCCAAAAAGCACATGCAGAAATCGTATGTGAATCCATATGTCTTTCAACGGGCAGTTAAAACCAGCTGGCATTCATCAGCTGTAGTCCATCCAGATCTTAAACAAATTAATATTGACGAAAATGACAATACTACCCTTGATGGGCAGAGTGGTGCCATTGTGCCATTCAGATCTGCTGCTAACTCTAGCTTCAGTAACTTTGATGAAGAACTGTCCAGTTTACAGGAGAAGTACTCATCTTCATGCAGAGTGTATAGTTTCCAAGAACTTGCTTCTGCAACCGCTAACTTCTCGCCTGAAAATTTGGTTGGCAAAGGCGGCAGTAGCTATGTTTATAAAGGATGTCTTGCAGATGGCAAGGAGGTGGCTGTGAAAATTTTGAAGCCATCAGAAGATGTGGTCAAAGAGTTTCTTTTGGAAATTGAGATCATCACAACTTTGCATCATAAGAACATAATATCTTTATCTGGGTTTTCTTTTGACGACAATAATTTGCTTTTGGTTTATGATTTTCTAACAAGAGGAAGCCTAGAAGAGAACATTCATGGTGATAAGAAGGACTCTAATGAATTTGGTTGGCAAGAGAGGTACAAGGTGGCTGTGGGTGTTGCTGAGGCATTGGACTTTCTGCATAATGGCTGTGCACAGGCTGTGATTCACAGGGATGTAAAATCTTCAAACATCCTTCTTTCAGATAATTTTGAGCCTCAGCTCTCCGATTTTGGACTAGCCAGTTGGGGTTCTTCGTCATCCCATGTTACTTGTACTGATGTGGCTGGAACCTTTGGATACCTGGCTCCAGAGTACTTTCTGCATGGTAGGGTAACTGACAGAATTGATGTATATGCATTTGGTGTCGTGCTTCTTGAGCTTCTTTCTAGCAGGAAGCCCATCAACAACGAATCCCCTAAGGGCCAGGAGAGCCTTGTGATGTGGGCAAGACCAATTCTAAAGGATGGAAAGCTCTCCCATTTGCTTGATTCAAGCCTTTGCGATCCTGACCATGGGCTGATTGACAGAATGGTTTTGGCTGCTACCCTTTGCCTCCGACAATCACCTAAATGTCGACCTCAAATCAGCATCATATTGAAGCTTTTGCAAGGTGATGAGGAAGTCACAAGTTGGGCGAGTCAAGAAGTTGGTGCACCAGAAGAACTTGACGCCTTTGATGGGGGACCAAATAATATCCAGTCCCATCTGAACCTTGCTTTGCTGGACCTGGACGATGATACAGTTTCTGTAAGTAGCTCTGAGCAGAGTGTCTCATTGGAGGACTATTTACAAGGAAGATGGAGTCGCTCGTCAAGTTTTGATTAA 2094 0.4522 MKLTGDGMASEEGTSDCDGIRTVVVGVKLDPRSRELLTWALVKVAEPGDHVIALHVLGSIPGGTGSFLSLVNTFESVLAVYEGFCNLKQVDLKLKVCRGESARKLIVREAKSFGASTVIVGTSKTHHTIRSSASVAKYCAKKLPKCISVFAVDNGKIAFHREATKICGAQVKLTEGPALLTKSFKPGTKTNLMNCECCERVLALPESTAIEDAPDDQEKKDSLALVPLQKIGDGQGCATVVEESNQSKHGWSVLRQVFLPKKHMQKSYVNPYVFQRAVKTSWHSSAVVHPDLKQINIDENDNTTLDGQSGAIVPFRSAANSSFSNFDEELSSLQEKYSSSCRVYSFQELASATANFSPENLVGKGGSSYVYKGCLADGKEVAVKILKPSEDVVKEFLLEIEIITTLHHKNIISLSGFSFDDNNLLLVYDFLTRGSLEENIHGDKKDSNEFGWQERYKVAVGVAEALDFLHNGCAQAVIHRDVKSSNILLSDNFEPQLSDFGLASWGSSSSHVTCTDVAGTFGYLAPEYFLHGRVTDRIDVYAFGVVLLELLSSRKPINNESPKGQESLVMWARPILKDGKLSHLLDSSLCDPDHGLIDRMVLAATLCLRQSPKCRPQISIILKLLQGDEEVTSWASQEVGAPEELDAFDGGPNNIQSHLNLALLDLDDDTVSVSSSEQSVSLEDYLQGRWSRSSSFD 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2175 697 SUPERFAMILY Protein kinase-like (PK-like) 336 625 IPR011009 -
Alju06g2175 697 Pfam Protein kinase domain 359 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2175 697 PANTHER OS08G0249100 PROTEIN 73 636 IPR046958 -
Alju06g2175 697 Gene3D Transferase(Phosphotransferase) domain 1 431 640 - -
Alju06g2175 697 Pfam Universal stress protein family 20 145 IPR006016 -
Alju06g2175 697 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 325 430 - -
Alju06g2175 697 Gene3D Phosphorylase Kinase; domain 1 326 430 - -
Alju06g2175 697 SMART serkin_6 356 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2175 697 CDD USP_Like 22 147 - -
Alju06g2175 697 ProSiteProfiles Protein kinase domain profile. 356 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2175 697 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Alju06g2175 697 Gene3D HUPs 19 153 IPR014729 -
Alju06g2175 697 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 144 - -
Alju06g2175 697 FunFam Putative receptor-like serine/threonine-protein kinase 431 641 - -
Alju06g2175 697 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Alju06g2175 697 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 20 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2175 Alju-ChrAlju06 47922007 47925208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2175 344 696 Trihelix Transcription Factor Family AT1G70460 39.945 2.47e-72 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Alju06g2175 Pkinase 1.7e-41 CL0016