Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2147 ATGGAAAGATATCATGCAGTGGGGTCTTTCGTCTCGGTGGAAGACAGCCTAAGGAGGTGCCTGAAAGGTTTCGTATGGATAGAAGAAAAAGGAAGTTTAGTAGGGATGCAAGAATTTGAAGAACAAAGATCTAGTGGGAAAGCACTTCGTTTTGAAAGGGAAAGACAGCTCTGCTTAGTTCTGTGCATCATGGATTATGCTTGCCTAGTGATGTGTCAGAATATAGGAAATATTATGGGAAGTGAAAGGGTGAATCTTCCACCTGGCTTTATCTTCTCTCCAACAGATGAAGAACTAGTCCTTCACTTTCTTTATCCCAAGTCTTCCCTTCTACCCTGCCATCCCAATATCATCCCTGACCTTGACCTCTCTCTCTTTCACCCTTCCCAACTCAACGGGAAGGCGTTGTTAAGTGGAAACCAATACTATTTCTACACAAAGTATAAGAACATAAGAGTGACAGAAAGTGGGTATTGGAAGGAAATAGGTGTGACTGAGTCAGTAGTCTCATCTGATGCAGGCAAGAAAGTTGGGATCAAGAAGTCTTTGGTGTTCAACAATGGAGAAGCTCCTCATGGTACTGAAACCAGCTGGCTCATGCAAGAGTATCATCTTTGCACTTCTGGGTTTAACACTCGAGGAACCCAAAAACCTGATACAAGTAAGTGGGTACTGTGCCGAGTCTGTGAAAAGAAGAGAGATTCTGAAGATGATGAAGCTGAGAGTACAGAGCTTTCATGGATGGATCAAGTGTACATGTCGATGTTGGATGAAGAAGAAGAAGAAGAAGAAGAAGTTAGCTTTCCCTAA 810 0.4272 MERYHAVGSFVSVEDSLRRCLKGFVWIEEKGSLVGMQEFEEQRSSGKALRFERERQLCLVLCIMDYACLVMCQNIGNIMGSERVNLPPGFIFSPTDEELVLHFLYPKSSLLPCHPNIIPDLDLSLFHPSQLNGKALLSGNQYYFYTKYKNIRVTESGYWKEIGVTESVVSSDAGKKVGIKKSLVFNNGEAPHGTETSWLMQEYHLCTSGFNTRGTQKPDTSKWVLCRVCEKKRDSEDDEAESTELSWMDQVYMSMLDEEEEEEEEVSFP 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2147 269 ProSiteProfiles NAC domain profile. 86 231 IPR003441 GO:0003677|GO:0006355
Alju06g2147 269 Gene3D NAC domain 95 236 IPR036093 GO:0003677|GO:0006355
Alju06g2147 269 PANTHER NAC TRANSCRIPTION FACTOR 56 86 243 - -
Alju06g2147 269 Pfam No apical meristem (NAM) protein 87 205 IPR003441 GO:0003677|GO:0006355
Alju06g2147 269 SUPERFAMILY NAC domain 81 231 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2147 Alju-ChrAlju06 47497003 47500056 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2147 84 233 NAC Transcription Factor Family AT5G13180 43.949 2.79e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju06g2147 NAM 5.1e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2147 06 47497003 47500056 Alju06g2147 06 47497003 47500056 ECH