Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2134 ATGGGAAGCAAAGCAGAAGTGTTCAAGCCTTCACGAAGTCTAAGGTCGGGAGATCCTCGCTCCCACTCACAGCGAGATCACCATAAGATGAAGGAAGCTGATCCCACTAGGCAAGGTATAAAGAGGGTGATTGGAAAGGACTCTTCGTCATCATTTGTTGGCTTTTATGACGTGACGTATTCTCTTGTTGAAGGGACGTGGTCGCTATTCAAAATAGAATCAAATCAAGAGGCAAGAGAGCATAGATGTACGCGGAATGATATGAATCTCTTCTATCTTAATCGCTTCTCTGAGCGTCTTGTTGCTCCTCTCTACTCTACAACTCCCATCAGGAGCCACAGGACGGATAATATTGCTATTGAGGGTCGTAACCTGAATTTCTCGTTCCCCACCAGGCATGTGAAAGCTGTGCCGATTCTTCGGGATTGTTCAATTCGCATTCCTTCTGGGCAGTTTTGGATGCTTCTTGGACCCAACGGATGCGGGAAATCTACCCTCTTAAAGATATTAGCTGGGCTCTTAAATCCTACGTCAGGAACAGTGTACGTGAAAGGGCCCAAAAGTTTTGTTTTCCAAAATCCGGATCATCAGGTGGTAATGCCTACAGTGGAATCTGACGTTGCATTTGGTCTTGGCAAGTTCAATCTAACCTGTGATGAAGTGAGATCAAGGGTATCAAGAGCCTTGCATGCTGTGGGCATGTCTGACTACATGCAGAGATCTGTTCAAACTCTAAGTGGTGGTCAGAAGCAGAGGGTTGCCATTGCTGGTGCTTTAGCAGAAGCTTGTAAAGTTCTGTTGTTGGATGAGCTCACAACGTTCTTAGACGAAAGAGACCAGGTTGGTGTAATCAAAGCAGTTAGGAACTCTCTGGATACCTCTGCAGGGGTTACAGCATTGTGGGTGACTCATCGTTTAGAAGAATTGAACTATGCTGATGGTGCCGTCTACATGGAGGATGGGAAAGTTGTCATGTATGGAGATGCGGAAAGAATAAAAAGTTTCATTGAAGGCAGGCAATCCGACTATATCAAACAGATAAATTCTTGA 1050 0.4514 MGSKAEVFKPSRSLRSGDPRSHSQRDHHKMKEADPTRQGIKRVIGKDSSSSFVGFYDVTYSLVEGTWSLFKIESNQEAREHRCTRNDMNLFYLNRFSERLVAPLYSTTPIRSHRTDNIAIEGRNLNFSFPTRHVKAVPILRDCSIRIPSGQFWMLLGPNGCGKSTLLKILAGLLNPTSGTVYVKGPKSFVFQNPDHQVVMPTVESDVAFGLGKFNLTCDEVRSRVSRALHAVGMSDYMQRSVQTLSGGQKQRVAIAGALAEACKVLLLDELTTFLDERDQVGVIKAVRNSLDTSAGVTALWVTHRLEELNYADGAVYMEDGKVVMYGDAERIKSFIEGRQSDYIKQINS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2134 349 PANTHER ABC TRANSPORTER I FAMILY MEMBER 10 120 334 - -
Alju06g2134 349 ProSitePatterns ABC transporters family signature. 245 259 IPR017871 GO:0005524|GO:0016887
Alju06g2134 349 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 120 345 IPR003439 GO:0005524
Alju06g2134 349 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 335 IPR027417 -
Alju06g2134 349 Pfam ABC transporter 140 272 IPR003439 GO:0005524
Alju06g2134 349 FunFam ABC transporter I family member 10 116 346 - -
Alju06g2134 349 CDD ABC_cobalt_CbiO_domain1 121 322 IPR015856 GO:0005524|GO:0016020|GO:0055085
Alju06g2134 349 MobiDBLite consensus disorder prediction 11 40 - -
Alju06g2134 349 SMART AAA_5 149 312 IPR003593 GO:0016887
Alju06g2134 349 Gene3D - 115 348 IPR027417 -
Alju06g2134 349 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2134 Alju-ChrAlju06 47413682 47421636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2134 120 347 Calmodulin-binding Proteins AT2G36910 30.120 3.24e-19 87.4