Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2131 ATGTCTTTTTATCTCCAAAAGGGATCAACATCCATTGTTGGGTGCCTTTTTAGCTTCATGAACCGAGGGAGGCTGTGGTACTTATTGATGGGTACGAAAAAATTGATTCCTGGGTTTCGATTTCATCCGACTGATGTTGAGCTCCTCGTATACTTTCTGAAGAGGAAGGTTATGGGAAAAAAATTCCCGTATGATGTGATCGCAGATGTAGAAATAAAGAAGTACGCTCCATGGGATCTTCCCGATAAATCTTATCTGACGACTGGAGATTTGGAATGGTACTTTTTTTGCCCCAGAGAAAAGAAATATGCCAGTGGGGCCAGAATGAATCGCGCTACGGAAGTTGGGTACTGGAAAACTACTGGGAGGGATAGACCTGTTCATCATGAGAATCGAGTTGTGGGAATGATAAAAACCCTGATATTTCACACAGGTAGAGCTCCTAAAGGTGATAGAACTAATTGGGTTATGCATGAATTTAGGCTCGAAGATCCGGTTCTGGCTGATAAAGGCATTCCTCAGGATTCCTATGTGCTTTGTAAGATTTTCCAAAAAGATGGTCCTGGTCCTAGGAATGGCGCCCAATATGGGAGACCATTCAATGATGAAGACTGGGATGATGATGAAGAAAAAGTTGATGATGTAGGATCTCTCCCATTAATTGGCGTCCATGCTCCAATTACCGTTGATCCTAATACACCTGGCAGTTCTACAGCAACTCATGGTCATCCCCCTGCGAGTACATGTGTTGGATCATCCCCATCGTCATGTCTTATGCATCCTTCGGCTCCAACTGATCAAGTTATATCCAATAATGGGTCTCAGGTTCCAGTTGTTGATGACATTACTGAATTGCTGGGTTCTTTCACTGAGAATGACCCAGTGGCTGTGATTGAAAATAACATTGAGAAGAATGATAATTCTGCTATGAACAAGGAAGGTGAGGGCGAACTTTGTTCGGATCCCAATGATATATTCAAGGACTTGGGGGACCTTGACTATACAAATCAAACCTATCCTGCTGGTAGCTTGCCCTCGGACTTTTTTGATGATTTGGATTTCTTGGAGCTGCGTGACTTGGACAACACCATTGGCCCACCACACGGAACCTGA 1113 0.4358 MSFYLQKGSTSIVGCLFSFMNRGRLWYLLMGTKKLIPGFRFHPTDVELLVYFLKRKVMGKKFPYDVIADVEIKKYAPWDLPDKSYLTTGDLEWYFFCPREKKYASGARMNRATEVGYWKTTGRDRPVHHENRVVGMIKTLIFHTGRAPKGDRTNWVMHEFRLEDPVLADKGIPQDSYVLCKIFQKDGPGPRNGAQYGRPFNDEDWDDDEEKVDDVGSLPLIGVHAPITVDPNTPGSSTATHGHPPASTCVGSSPSSCLMHPSAPTDQVISNNGSQVPVVDDITELLGSFTENDPVAVIENNIEKNDNSAMNKEGEGELCSDPNDIFKDLGDLDYTNQTYPAGSLPSDFFDDLDFLELRDLDNTIGPPHGT 370
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2131 370 ProSiteProfiles NAC domain profile. 35 185 IPR003441 GO:0003677|GO:0006355
Alju06g2131 370 Gene3D NAC domain 44 187 IPR036093 GO:0003677|GO:0006355
Alju06g2131 370 FunFam Nac domain-containing protein 86 44 188 - -
Alju06g2131 370 MobiDBLite consensus disorder prediction 190 211 - -
Alju06g2131 370 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 34 259 - -
Alju06g2131 370 SUPERFAMILY NAC domain 26 185 IPR036093 GO:0003677|GO:0006355
Alju06g2131 370 Pfam No apical meristem (NAM) protein 37 162 IPR003441 GO:0003677|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Alju06g2131 Alju-ChrAlju06 47383834 47386624 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2131 30 369 NAC Transcription Factor Family AT5G09330 43.380 4.73e-90 277
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju06g2131 NAM 8.8e-34 No_clan