Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2115 ATGACCGAGCCTCCTCCCAGAAATCCTCACTCCCCTTTCTTTCTTCCCAAATCTTCTTTTCTTCTCTTTTCCATGGCTTCTCTTCTCTCTCTTTCCCTTCTCTCCTTCTTCCTCTTCCTTTCTCTCTCCTCCGCCGCCCGTCACCACCACAAACCACCACCCGCAACCTCCCCCTCCACCTCCTCCTCCGTTGCCGTCCAGAACGCCTGTAAAGCTACTCGCTTCCCTGAACAATGCCAATCTTCTCTCACCAAACTCCCTCCGGATCCCACCCCGGTTCAAATCCTCCAATCCGCCTTGTCTGTCTCGTCGGAGAATCTCAAGACGGCGCAATCCATGGTCAAGTCCATCCTCGACTCATCAGCGTCGAGCATTAACCGCACCACCGCTTGCAAGGTCTGCGTGGAGGTGCTTCGTTGCTCCGACTACCGCATCGGTCTGGCCAATGACGCGCTGCCGCGTGCCAGGATCAAGGACGCTCGCGCATGGATGAGCGCTGCCCTGCTCTACCAGTACGATTGCTGGTCCGCTTTGAAGTACGCCAACGACACTCGCCAGGTCGGTGAGGCGATGGCGTTCTTGGACTCACTCACCAGGATCTCGAGCAACGCGTTGAGCATGATCGCGTCGTACGACGTCGTCGGAAACAACACCGCCTCATGGAGGCCACCTTTAACGGAGCGTGATGGGTTTTGGGAAGGATCCGGGTCGGGTTCTGGGTCGTTGGCTTTCAGGGGCGGGTTTCCGGCGAAAGTGAAGCCGGACGTTACGGTGTGTAAGGGTGGAGGGAATGGGTGTTACAAGACGGTCCAGGAGGCTGTTAACGCCGCACCGAATAACGCGGGAGACAAGAAATTTGTGATATACATAAAGGAAGGTGTTTATGAAGAGACTGTTAGGGTTCCGTTGGAGAAGAAGAATGTGGTGTTCTATGGGGACGGTATGGGCAAGACCGTCATAACCGGGTCTGCTCAGGCGGATCAACCCGGAATGACGACATACCTTTCAGCTACTGTTGCTGTTCTGGGTGATGGATTCATGGCCAAGGCTCTAACAATCCAGAACACAGCAGGCCCTGTTGCTCATCAAGCAGTGGCCTTAAGATCAGACAGCGATTTCTCTGTGTATGAAGAATGCGAATTCGTAGGCAATCAAGACACACTGTACGCTCACTCCCTTCGCCAATTTTACAAATCATGCCGCATCCTCGGCAACGTAGACTTCATCTTTGGCAACTCGGCCTCCATCTTCCAAGACTGCCAGATCCTAGTCCGGCCCCGGCAAGTGAAGCCGGAGAGCGGCGAGAACAACGCTGTCACCGCGCATGGCAGAACAGATCCTGCTCAGACAACTGGCTTTGTTTTCATGAACTGCTTGATCAATGGGACTAAGGAGTACATGGATTTGTACCATAGCAAGCCTCAGAAGCACAAGAACTACTTGGGGAGGCCATGGAAGGAGTACTCTAGAACAGTTTTCATTAACTCTTTCTTAGAAGAACTGATCACACCCACTGGGTGGCTGCCATGGAGTGGTAATTTTGCACTAAAGACGCTTTACTATGGAGAATATACCAACACAGGACCTGGTTCTGATCTGAGTCAGAGAGTTCCATGGAGCAGTAAGGTCCCAGCTGAGCATGTGTCTGCATATTCAGTTCAGAATTTCATCCAAGGGGATGACTGGATTCCATCATCCTTGATTAGCTCCTTAGATTTGTCATAG 1725 0.5258 MTEPPPRNPHSPFFLPKSSFLLFSMASLLSLSLLSFFLFLSLSSAARHHHKPPPATSPSTSSSVAVQNACKATRFPEQCQSSLTKLPPDPTPVQILQSALSVSSENLKTAQSMVKSILDSSASSINRTTACKVCVEVLRCSDYRIGLANDALPRARIKDARAWMSAALLYQYDCWSALKYANDTRQVGEAMAFLDSLTRISSNALSMIASYDVVGNNTASWRPPLTERDGFWEGSGSGSGSLAFRGGFPAKVKPDVTVCKGGGNGCYKTVQEAVNAAPNNAGDKKFVIYIKEGVYEETVRVPLEKKNVVFYGDGMGKTVITGSAQADQPGMTTYLSATVAVLGDGFMAKALTIQNTAGPVAHQAVALRSDSDFSVYEECEFVGNQDTLYAHSLRQFYKSCRILGNVDFIFGNSASIFQDCQILVRPRQVKPESGENNAVTAHGRTDPAQTTGFVFMNCLINGTKEYMDLYHSKPQKHKNYLGRPWKEYSRTVFINSFLEELITPTGWLPWSGNFALKTLYYGEYTNTGPGSDLSQRVPWSSKVPAEHVSAYSVQNFIQGDDWIPSSLISSLDLS 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2115 574 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 65 208 IPR035513 -
Alju06g2115 574 NCBIfam pectinesterase inhibitor domain 31 209 IPR006501 GO:0004857
Alju06g2115 574 Pfam Pectinesterase 255 560 IPR000070 GO:0030599|GO:0042545
Alju06g2115 574 SUPERFAMILY Pectin lyase-like 252 568 IPR011050 -
Alju06g2115 574 SMART PMEI_2 61 207 IPR006501 GO:0004857
Alju06g2115 574 Gene3D Invertase/pectin methylesterase inhibitor family protein 61 211 IPR035513 -
Alju06g2115 574 CDD PMEI-like_3 69 212 - -
Alju06g2115 574 FunFam Pectinesterase 249 572 - -
Alju06g2115 574 FunFam Probable pectinesterase/pectinesterase inhibitor 51 64 210 - -
Alju06g2115 574 Pfam Plant invertase/pectin methylesterase inhibitor 65 207 IPR006501 GO:0004857
Alju06g2115 574 Gene3D - 249 571 IPR012334 -
Alju06g2115 574 PANTHER PECTINESTERASE 39 564 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2115 Alju-ChrAlju06 47117882 47120129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2115 57 562 Carbohydrate Esterase AT5G09760 66.992 0.0 722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2115 06 47117882 47120129 Alju06g2115 06 47117882 47120129 ECH