Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2106 ATGAACCTGCCGGGGAATTCTGCCGGCGGAAAAACACCACCGTCGCCTCAGAACCAAACTCAACTCCAATGGCCTGGGCAACCTCATCAGAATCAACTTCGAATCCAAGAGCCTAGCCAACGGCCTCCTATTATAGCCAACCAAGAATCTCATGTTATCAACGAACCATTTCAGCCACCGCATCATGCCGCCGGCGGAAGAATAACACCACCACTGTCGTCGAGACAACATGGAATCCAAGAGCCTGGCCAACCTCCTCCTTCTAGAGCCAACAACGAATCACTCATCACTATCAGGCAACCATGGCGGCCACTATACTCCGCCGGCCGAAGAACAAGTTTAGAGTCCCTTCAATATCAACAACGTTCTCCCAGAGTCAACCAAGAATCCCACACTATCAAGAAACACAAACGGCCTCCCCAACATGCCTCCGGCAGGCAATGCCCACATCATATTGTAAAGAACCATAAGGAATTCAAAGAATTAGTCCAGCGCCTAACAGGGAAACGGTCTTCCTCCGGGACCCAATTGGGGCAGGGAAGGCCAAGAAAATCATCATCATCGACTCCTCCGACAACAACATCACAAAGTCCGGTGGTCCCAAAAACGACGCCGTTCGTGGGGCATGATGATATTGGGAACAATAGCATCCCTGTGACTGTGAGCCCAACAGCATCAGAAATATTGGCAGATATAGAGTCAGCACCAGCAACCTTGGATGAAGATAAATCATCATCATCATCGACGTCACCATATGGTTTGTCACAGGTGCCAAACACACTTCTGTCCAATCAATCCAATGATCCTCGTAGCTGTGCCAAATGCGGCAACACTTCCACGACCCAATGGAGAAATGGCCCCCGAGGTCCAAAGTCACTGTGCAATGCCTGTGGGATCAGATTCAATAGGAAGGAAGAGACAAGAACCGCAACGGCTTCCGTATCATCGGGATTTCAGTCATCCGACATACTTTTGCCACCGGGAATGTCACTACCGGCGGCACCAAGTTTTGAGCAGGAAGCTCCATATGGTTTCTCACACCTCCAAAACAGAGTTCAGCTCATGGACAATGTGTCGGAAAATAGCTTATTGAGATTCTTATCGAAATTACAATCATCCAGCGTAGTTTCGCCGCCACAAGTCATCGTCAGCACCGGCGCACCAAGTCTTGCAAGCAGAGTTCAGCTCGCGGAAAATATCTTATTGGGAGACCCATCGAGATCACAGTCATCATCACCATCGCGGGACCCACCAGAAGTAGCATCAATGATGGAGGAGTTCAGGCAAAGCCTGACAGAAAAAACTCCACACAACAGCCCTGGACCATAG 1329 0.4974 MNLPGNSAGGKTPPSPQNQTQLQWPGQPHQNQLRIQEPSQRPPIIANQESHVINEPFQPPHHAAGGRITPPLSSRQHGIQEPGQPPPSRANNESLITIRQPWRPLYSAGRRTSLESLQYQQRSPRVNQESHTIKKHKRPPQHASGRQCPHHIVKNHKEFKELVQRLTGKRSSSGTQLGQGRPRKSSSSTPPTTTSQSPVVPKTTPFVGHDDIGNNSIPVTVSPTASEILADIESAPATLDEDKSSSSSTSPYGLSQVPNTLLSNQSNDPRSCAKCGNTSTTQWRNGPRGPKSLCNACGIRFNRKEETRTATASVSSGFQSSDILLPPGMSLPAAPSFEQEAPYGFSHLQNRVQLMDNVSENSLLRFLSKLQSSSVVSPPQVIVSTGAPSLASRVQLAENILLGDPSRSQSSSPSRDPPEVASMMEEFRQSLTEKTPHNSPGP 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2106 442 MobiDBLite consensus disorder prediction 166 202 - -
Alju06g2106 442 MobiDBLite consensus disorder prediction 402 442 - -
Alju06g2106 442 MobiDBLite consensus disorder prediction 1 54 - -
Alju06g2106 442 Pfam GATA zinc finger 272 305 IPR000679 GO:0006355|GO:0043565
Alju06g2106 442 MobiDBLite consensus disorder prediction 1 219 - -
Alju06g2106 442 MobiDBLite consensus disorder prediction 232 289 - -
Alju06g2106 442 MobiDBLite consensus disorder prediction 239 288 - -
Alju06g2106 442 CDD ZnF_GATA 271 320 IPR000679 GO:0006355|GO:0043565
Alju06g2106 442 MobiDBLite consensus disorder prediction 402 417 - -
Alju06g2106 442 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 266 310 - -
Alju06g2106 442 ProSiteProfiles GATA-type zinc finger domain profile. 266 321 IPR000679 GO:0006355|GO:0043565
Alju06g2106 442 SMART GATA_3 266 320 IPR000679 GO:0006355|GO:0043565
Alju06g2106 442 MobiDBLite consensus disorder prediction 111 127 - -
Alju06g2106 442 MobiDBLite consensus disorder prediction 73 98 - -
Alju06g2106 442 PANTHER GATA TRANSCRIPTION FACTOR 18 221 316 IPR044272 GO:0003700|GO:0009908
Alju06g2106 442 MobiDBLite consensus disorder prediction 151 165 - -
Alju06g2106 442 Gene3D - 262 318 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2106 Alju-ChrAlju06 47001547 47003045 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2106 269 326 C2C2-Gata Transcription Factor Family AT2G18380 58.621 2.98e-14 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Alju06g2106 GATA 1.3e-13 CL0167