Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2104 ATGCTGAGTTCTAAAAATGAAGGAGATATTATTTATGATGATGATGTGTTCTTCGACTCAGCAGATTATCTGTTACCTCAAGAATTTTCTGATTTAGGTTCAAACGAGTTGGATTATGAGATTTGGGTGAATGAACCTCAAAGTGTGAAGGAAAGACGACGACGTTTTCTTGAGGGAATGGGTTTTTCTGGTTTATCAGACATGTCTTCAAAAACATCCTTGGAACCAGAGAGAAGAATTACGGACAACAATAATGGAGCTGTCTCAAATAATGAAGTTGAGAAAGAAACTTCTGAAGCAAACATGTTTGATGAAATGACAATGTTTCCTGAAGAAGATGTAAGCTTTCATGAGACCAGGCACACAGAAGCTGAAGTCCAACAAAGACATGTGGATTTAGATATGGAACAAAAGAAGAAGAAGAAGAAATGGTGGGAGAGATTTGTGAACAAGAAAAAACAAAGTGGGGCAATTAAGAGTCATAGGATAAAAGTGAGACAGAACAAGAAGATGTGGATGGAGTTAAGTGGGTTATATGTTGGACAAGAGATTAGAGCTCACAATGGCATTATATGGACTATGAAATTCAGTCCCAATGGGAAGTATCTTGCGACGGGAGGCGAAGATGGAGTCGTAAGAATATGGCGTGTCATGTTACAGGACATATCTAGTGACTGTTTCAATGAAGAGGACAGTGTCGTTACCAAAGTGAAACAAGACATGTTCTGTTCTTGGAAGAAACAGTCAGGTCAAAGAAACTGCCTTGTCCTTCCAAACAAGGTTTTTCAAATTGAGGAATCACCACTTCAAGAATTCTATGGTCATTCTAGTGATGTCTTGGACTTGGCATGGTCTAATTCAGATATTCTCCTTTCATCTTCCATGGATAAAACCGTCCGTTTGTGGCAAATTGGATGTGATCAAAACTTAAGTGTTTTTCGTCACAATGATTATGTAACATGCATTCAAGTGAATCCAGTTGATGAAAATTACTTCATAAGTGGGTCCATTGATGGCAAAGTCAGAATATGGGGAGTACATGAAGAGAGGGTTGTTGACTGGGCAGATATACATGAAGTGATAACTGCTATAAGTTACAAGCCTGATGGAAAAGGATTTGTAGTGGGCTCCATTTCAGGCACTTGCCGCTTTTATGTTACTTCAGATGAACATTGCAGATTTGAGGCACAGATTCATGTTGATGGAAAGAAGAGATCAAGAGGCAACAAAATTAATGGAATTCAGTTTTCCCAGGAGAGACATCAGAGAGTTCTGATCACATCAGAAGATTCCAAATTTTGCTTATTGGAAGGGATTGATGTTGTCCACAAATACAGAGGTCTTTCTAGGTCAAGTCAGATGTGTGGTTCATTTACATCAAGTGGAAAACACATAATTTCAGTTGGAGAGGATTCTCATGTGTACATTTGGAACTCAAGTGACTTACAAAACCCATCACCTAAACACAAAAAATCCACTGGGTTTTGTGAATACTTTTTCTCAAAAGGTGTTGTTGTAGCAGTACCTTGGTCAGGCATGAGCACAGACCAAATGGTCACTACTGGTTTAACACAGTACTGTTCTTCAGACTTATTACAACCCCAAATGCTTGAACATAGAGGAAGAGGACAATGTTTTTCTCATAGCAATTGGTTCTCGGTTGATCACACGTGTCGGGGATCTGTGACGTGGCCCGAAGAGAAGCTTCCTACGTGGACTTCGCCTTCTGCAGAAGAAGAAGATTCTTATTATAGCCATCATCAACAGAAGAAGCTATGTCCAAAGGATCCTTGGGGTTTGTCAATTGTGACAGCTAGTTGTGATGGGACTATAAGGACATTTCACAACTTTGGATTGCCTGTTAGGCTTTAG 1872 0.3948 MLSSKNEGDIIYDDDVFFDSADYLLPQEFSDLGSNELDYEIWVNEPQSVKERRRRFLEGMGFSGLSDMSSKTSLEPERRITDNNNGAVSNNEVEKETSEANMFDEMTMFPEEDVSFHETRHTEAEVQQRHVDLDMEQKKKKKKWWERFVNKKKQSGAIKSHRIKVRQNKKMWMELSGLYVGQEIRAHNGIIWTMKFSPNGKYLATGGEDGVVRIWRVMLQDISSDCFNEEDSVVTKVKQDMFCSWKKQSGQRNCLVLPNKVFQIEESPLQEFYGHSSDVLDLAWSNSDILLSSSMDKTVRLWQIGCDQNLSVFRHNDYVTCIQVNPVDENYFISGSIDGKVRIWGVHEERVVDWADIHEVITAISYKPDGKGFVVGSISGTCRFYVTSDEHCRFEAQIHVDGKKRSRGNKINGIQFSQERHQRVLITSEDSKFCLLEGIDVVHKYRGLSRSSQMCGSFTSSGKHIISVGEDSHVYIWNSSDLQNPSPKHKKSTGFCEYFFSKGVVVAVPWSGMSTDQMVTTGLTQYCSSDLLQPQMLEHRGRGQCFSHSNWFSVDHTCRGSVTWPEEKLPTWTSPSAEEEDSYYSHHQQKKLCPKDPWGLSIVTASCDGTIRTFHNFGLPVRL 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2104 623 MobiDBLite consensus disorder prediction 67 97 - -
Alju06g2104 623 PRINTS G protein beta WD-40 repeat signature 332 346 IPR020472 -
Alju06g2104 623 PRINTS G protein beta WD-40 repeat signature 203 217 IPR020472 -
Alju06g2104 623 PRINTS G protein beta WD-40 repeat signature 290 304 IPR020472 -
Alju06g2104 623 ProSiteProfiles Trp-Asp (WD) repeats profile. 312 354 IPR001680 GO:0005515
Alju06g2104 623 MobiDBLite consensus disorder prediction 79 96 - -
Alju06g2104 623 SUPERFAMILY WD40 repeat-like 179 614 IPR036322 GO:0005515
Alju06g2104 623 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 272 304 - -
Alju06g2104 623 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 184 217 - -
Alju06g2104 623 Pfam WD domain, G-beta repeat 267 302 IPR001680 GO:0005515
Alju06g2104 623 Pfam WD domain, G-beta repeat 183 215 IPR001680 GO:0005515
Alju06g2104 623 Pfam WD domain, G-beta repeat 308 344 IPR001680 GO:0005515
Alju06g2104 623 ProSiteProfiles Trp-Asp (WD) repeats profile. 272 312 IPR001680 GO:0005515
Alju06g2104 623 SMART WD40_4 265 303 IPR001680 GO:0005515
Alju06g2104 623 SMART WD40_4 177 216 IPR001680 GO:0005515
Alju06g2104 623 SMART WD40_4 306 345 IPR001680 GO:0005515
Alju06g2104 623 SMART WD40_4 347 386 IPR001680 GO:0005515
Alju06g2104 623 SMART WD40_4 438 478 IPR001680 GO:0005515
Alju06g2104 623 ProSiteProfiles Trp-Asp (WD) repeats profile. 184 217 IPR001680 GO:0005515
Alju06g2104 623 PANTHER WD REPEAT DOMAIN 44 126 620 IPR040324 -
Alju06g2104 623 Gene3D - 175 521 IPR015943 GO:0005515
Alju06g2104 623 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 312 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2104 Alju-ChrAlju06 46991262 46993939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2104 269 339 U-box Gene Family AT2G33340 36.842 8.57e-06 47.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2104 06 46991262 46993939 Alju06g2104 06 46991262 46993939 ECH