Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2094 ATGGTTGCTTCTTCTAATTCTCAGTTACTGCGCTTCCATGATGACATTCTCGCCCATCAATTTCATTACTCTAGAAGGTTACTATTCCTTAACTCCAACCTCAACTCACCCAAAAACTCCACAGAACCTTCCATCCTCGGAGATGGTTATACCATAGATGCAAACGTCATCATGGTACTCTCTGTCCTCATATGTGCTCTCTTTTGCTCATTGGGTTTAAACTCCTTCATCAGATATGCCCTAAGGTGTTCCAACATCATCGTCCACGGTAATAACAACAACGAATCATCAAACCCTCCGGCCGCGGCTCGAGTGGCTGACAAGGGAGTGAAGAAGAAGGCCTTAAAGACTTTCCCTATAGTGACATACTCTTCTGAGTTGAACCTCCCAGGTTTAGACTCAGAGTGCGCGATTTGTCTCTCCGAGTTTAACAATGGCGATCGCCTTCGAATTCTTCCCAAGTGCAACCATGGCTTCCATGTTCGTTGTATTGACAAGTGGCTCAGCTCTCATTCTTCTTGCCCTAAGTGCAGACACTGCCTTATTCAGACATGTCACAAGATTGTGGGGTCATCAACGAGGACGACGTCATCCCAACCTTCTTCTACTATTGCTCCGGCTGAAGCTATTGTGAGGATTGCACCTTTAGAACCGGAGGGTATGGTGCGTAGCTATAGCTAG 681 0.4626 MVASSNSQLLRFHDDILAHQFHYSRRLLFLNSNLNSPKNSTEPSILGDGYTIDANVIMVLSVLICALFCSLGLNSFIRYALRCSNIIVHGNNNNESSNPPAAARVADKGVKKKALKTFPIVTYSSELNLPGLDSECAICLSEFNNGDRLRILPKCNHGFHVRCIDKWLSSHSSCPKCRHCLIQTCHKIVGSSTRTTSSQPSSTIAPAEAIVRIAPLEPEGMVRSYS 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2094 226 ProSiteProfiles Zinc finger RING-type profile. 136 178 IPR001841 -
Alju06g2094 226 SUPERFAMILY RING/U-box 114 183 - -
Alju06g2094 226 PANTHER RING-H2 FINGER PROTEIN ATL78 19 221 IPR044602 GO:0016567|GO:0016740
Alju06g2094 226 CDD RING-H2_EL5-like 135 178 - -
Alju06g2094 226 FunFam RING-H2 finger protein ATL73 97 183 - -
Alju06g2094 226 Pfam Ring finger domain 135 178 IPR001841 -
Alju06g2094 226 SMART ring_2 136 177 IPR001841 -
Alju06g2094 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 97 182 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2094 Alju-ChrAlju06 46871193 46871873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2094 26 187 C3H Transcription Factor Family AT1G20823 44.910 6.11e-40 134