Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2091 ATGATGGGGCGAGGGATTTTGCCATCAGAGGCGACTTTGAATCCGGCAAGGAGAAAGAGAGTGAAGAAGAAGAAGAACAAGAAGAAGGTGAGAGAATTGAGATCTTTTTCTCTTGGAGAAAAGATAAGAGCAAAGAACGGCGAGAGTGTTGAGAGCGATAGTTGGGAGAGAGAGCAGGCTGGATTTGCTGGTGATGGTGATCCTAGAGCAGTGTTTCCCAGCATTGTTGGGCGACCCAGGCATAGTGGTGTTACGGTAGGGATGGGTCAGAAAGATGCATATGTAGGTGATGAAGCCCTGTCAAAAAGAGGTATTCTTACTTTAAAGTACCCCATTCAGCAAGGTATAGTCACTAACTGGGATGACATGGAAAAGATTTGGCATCACACATTTTACAATGAGCTACGTGTTGCTCCTGAGGAACACCCTGTGCTTCTCACTGAGCCTCCTCTCAACCCAAAGGCCAACAGAGAGAAAATGACTCAAGTCATGTTTGAGACCTTTAATGTGCCTGCCATGTATGTAGCCATTCAGGCTGTTCTCGCTCTATATGCCAGTGGTCGTACAACTGGTATTCTTTTGGACTCTGGTGATGGTGTGACCCACACTGTGCCAATTTATGAGGGATTTACACTTCCTCAAGCTATTCTCCGTTTGAATCTTGCTGGCTGTGTTCTAACTGATTCATTGATGGAGTTCCTGGATAACAGAGGGTATACGTTTACTACCTCTGCTGAGCGGGAACTTGTATACGACATTAAGGAGAAACTTGCATATGTTGCTTTGGACTATGAGCAAGAGCTTGAGATTGCAAAGGCCAACTCTTCATTAGTGGACAAAAAGTATGAACTTCCTGACGGACAAGTCATTACAATTGGAGCTGAGAGATTCCGTTGTGCAGAGGTTCTTTTCCAGCCATCTATTGTTGGAATTGATGCTGCTGGAATCCATGAAACCATTTACAATTCTGTCATGAAGTGTGATGTGGATATCAGAAAGGATCTTTATGGAAACATTATTCTAAGTGGTGGTTCAACCATGTTTCCCGGTATGGCTGACAGAATGAGCAAGGAAATCACTGCACTTGCTCCAAGCAGCATGAAGATCAAGGTGGTGGCTCCGCCAGAGAGAAAGTACAGTGTCTGGATTGGAGGTTCAATTCTTGCATCTCTCAGCACCTTCCAGCAGATGTGGATTTCCAAGAGTGAATATGATGAGTCTGGTCCTTCCATTGTCCACAGGAAATGCTTCTAA 1254 0.4474 MMGRGILPSEATLNPARRKRVKKKKNKKKVRELRSFSLGEKIRAKNGESVESDSWEREQAGFAGDGDPRAVFPSIVGRPRHSGVTVGMGQKDAYVGDEALSKRGILTLKYPIQQGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEPPLNPKANREKMTQVMFETFNVPAMYVAIQAVLALYASGRTTGILLDSGDGVTHTVPIYEGFTLPQAILRLNLAGCVLTDSLMEFLDNRGYTFTTSAERELVYDIKEKLAYVALDYEQELEIAKANSSLVDKKYELPDGQVITIGAERFRCAEVLFQPSIVGIDAAGIHETIYNSVMKCDVDIRKDLYGNIILSGGSTMFPGMADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHRKCF 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2091 417 FunFam Actin, alpha skeletal muscle 49 193 - -
Alju06g2091 417 MobiDBLite consensus disorder prediction 17 31 - -
Alju06g2091 417 FunFam Putative actin-related protein 5 381 409 - -
Alju06g2091 417 MobiDBLite consensus disorder prediction 46 68 - -
Alju06g2091 417 ProSitePatterns Actins signature 1. 94 104 IPR004001 -
Alju06g2091 417 MobiDBLite consensus disorder prediction 46 63 - -
Alju06g2091 417 PANTHER ACTIN 46 410 IPR004000 -
Alju06g2091 417 CDD NBD_sugar-kinase_HSP70_actin 114 222 - -
Alju06g2091 417 Pfam Actin 59 417 IPR004000 -
Alju06g2091 417 Gene3D - 60 411 - -
Alju06g2091 417 MobiDBLite consensus disorder prediction 1 31 - -
Alju06g2091 417 FunFam Major actin 300 380 - -
Alju06g2091 417 ProSitePatterns Actins signature 2. 398 406 IPR004001 -
Alju06g2091 417 PRINTS Actin signature 156 169 IPR004000 -
Alju06g2091 417 PRINTS Actin signature 90 101 IPR004000 -
Alju06g2091 417 PRINTS Actin signature 278 294 IPR004000 -
Alju06g2091 417 PRINTS Actin signature 67 76 IPR004000 -
Alju06g2091 417 PRINTS Actin signature 181 200 IPR004000 -
Alju06g2091 417 PRINTS Actin signature 102 124 IPR004000 -
Alju06g2091 417 Gene3D - 179 380 - -
Alju06g2091 417 SMART actin_3 60 417 IPR004000 -
Alju06g2091 417 SUPERFAMILY Actin-like ATPase domain 187 417 IPR043129 -
Alju06g2091 417 SUPERFAMILY Actin-like ATPase domain 59 193 IPR043129 -
Alju06g2091 417 ProSitePatterns Actins and actin-related proteins signature. 145 157 IPR020902 -
Alju06g2091 417 Gene3D Actin; Chain A, domain 4 221 313 - -
Alju06g2091 417 FunFam Actin, alpha skeletal muscle 221 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2091 Alju-ChrAlju06 46832807 46836737 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2091 59 417 Cytoskeleton Gene Families AT5G09810 87.744 0.0 662