Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2080 ATGCTAGAGAATTCGAGTTTACCTGAAAGCTCCATTCAACACCGAAGCCACGCAGAGGACGGTGGTGATAACCCTTTGTCTGATGGACACCACCACGAACAGGTAGTTGTCTCAGCCGAAGATGTTGACCGGAATGGCACCGGTGGCCGGTGGCCTCCAGAAGAAACTAAAGCTTTGCTCAAGATAAGGTCTGACATGGACGCTGCTTTCAGGGACACATTCCCCAAAGTTCATCTTTGGGAACAAGTTTCCAGGAGATTAAGGGAGCTAGGATATAATAGGAGTGCTAAGAAATGCCAGGAGAAGTTTGAAAACGTGTACAAGTACTGCAGAAAGACCAAAGAAGGCCGGCCCAATGGTAAGACTTACCGATTCTTTGAGTTGTTAGAACCTCTCATGAACTCTCCTTACCCTGAAAAGAATGAAGAACAAGCGAGAAACACAGCAACAACCACAATCCCAATGGATTTATCCACTGTTATTCAAGGTGCAATTCAACATCAACAAGTGGAAAACATAGCAACAACTACAACCCCAATGGATTTAGCCTATGTTATTCAAGATTCAATTGCACATTCTATACGATTCTCTAGTGACCCCTCTAGTTTAACTACCCCTTCGTTGAGTGAAGAAGCGGATGGAGATATTCGAAAGAAGAAAAGGAAACTGACGCAGTATTTTGAGGGGTTGATGAACAAAGTACTAGAGAAGCAAGAGAAGCAACAGAAGAACTTCATGGAGATCTTTCTCAAATGTGAACAAGATAGAATTGCAAGAGAGGAAGCATGGAAGATGGAAGAATTAGCAAGGATTAAGAGGGAGCGAGAGCTTTTAGCTCAAGAAAGATCAATTGCTGCGGCGAAAGATGCTGCAGTGCTTGCCCTTCTGAGGAAGTTCACAGGACAAACGGGGACAATAGAATTACCTGAGAACCTGCTTCCAAGTGATTTAGATAAGGACGAGCAAGAAAATGATAATGCAGGAAGTAGTGTTATTGAAAAGCAAGAATGTGGAAATGGTGGCAATTTCACACTGACTAGTCCATCTTCTTCTAGATGGCCCAAAGATGAAGTGGAAGCTTTGATTAGATTGAGGACAAACTTTTATGTGGAGAATGAAGGAAATGGGGTTAAAGGGTTTATTCCTATATGGGAGGAGATATCTTCTGCAATGAAAAAACTTGGATACGATCGGAGTGCCAGAAGATGCAAAGAGAAATGGGAGAATATGAACAAATACTTCAAGAGGATGAAGATGACAAACCAGAAAAAGCCTCAGAGTTCTAAAACATGTCCTTATTTTCACCAGCTGGATGCTCTGTATAATAATAGTGAAAAGCCTAATAACGAGAAGGTGGATGATTCAGCCAGTTCTGATAAAGATCAACTGAAACCTGAGGAGCTACTAATGCATCTTATGGAGGATCAGTCCCAGACCTCATCAGAGGATGCTGACAGAGAAGAAGGATCAGAATAA 1476 0.4228 MLENSSLPESSIQHRSHAEDGGDNPLSDGHHHEQVVVSAEDVDRNGTGGRWPPEETKALLKIRSDMDAAFRDTFPKVHLWEQVSRRLRELGYNRSAKKCQEKFENVYKYCRKTKEGRPNGKTYRFFELLEPLMNSPYPEKNEEQARNTATTTIPMDLSTVIQGAIQHQQVENIATTTTPMDLAYVIQDSIAHSIRFSSDPSSLTTPSLSEEADGDIRKKKRKLTQYFEGLMNKVLEKQEKQQKNFMEIFLKCEQDRIAREEAWKMEELARIKRERELLAQERSIAAAKDAAVLALLRKFTGQTGTIELPENLLPSDLDKDEQENDNAGSSVIEKQECGNGGNFTLTSPSSSRWPKDEVEALIRLRTNFYVENEGNGVKGFIPIWEEISSAMKKLGYDRSARRCKEKWENMNKYFKRMKMTNQKKPQSSKTCPYFHQLDALYNNSEKPNNEKVDDSASSDKDQLKPEELLMHLMEDQSQTSSEDADREEGSE 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2080 491 ProSiteProfiles Myb-like domain profile. 351 411 IPR001005 -
Alju06g2080 491 Pfam Myb/SANT-like DNA-binding domain 351 440 IPR044822 -
Alju06g2080 491 Pfam Myb/SANT-like DNA-binding domain 50 130 IPR044822 -
Alju06g2080 491 ProSiteProfiles Myb-like domain profile. 43 107 IPR001005 -
Alju06g2080 491 FunFam Trihelix transcription factor GT-2 353 416 - -
Alju06g2080 491 CDD GT1 351 418 - -
Alju06g2080 491 Gene3D - 353 416 - -
Alju06g2080 491 Gene3D - 51 112 - -
Alju06g2080 491 MobiDBLite consensus disorder prediction 311 351 - -
Alju06g2080 491 MobiDBLite consensus disorder prediction 313 327 - -
Alju06g2080 491 SUPERFAMILY Homeodomain-like 351 418 IPR009057 -
Alju06g2080 491 PANTHER FI21293P1 7 481 - -
Alju06g2080 491 MobiDBLite consensus disorder prediction 442 491 - -
Alju06g2080 491 MobiDBLite consensus disorder prediction 328 351 - -
Alju06g2080 491 FunFam Trihelix transcription factor GT-2 51 112 - -
Alju06g2080 491 MobiDBLite consensus disorder prediction 447 471 - -
Alju06g2080 491 MobiDBLite consensus disorder prediction 13 30 - -
Alju06g2080 491 SMART sant 349 413 IPR001005 -
Alju06g2080 491 SMART sant 47 109 IPR001005 -
Alju06g2080 491 CDD GT1 50 114 - -
Alju06g2080 491 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2080 Alju-ChrAlju06 46734874 46736666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2080 46 446 Trihelix Transcription Factor Family AT1G76890 43.913 4.53e-110 336
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Alju06g2080 Myb_DNA-bind_4 1.5e-20 CL0123