Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2074 ATGATCAAGCTTCTCTTCCCTAAAAATGTCACTATTATATCATCTTTTTGTTCCTCCTCGCCATTAGCTCGGCCTCTTCTCCTCCAAATTTGTCACTTCTCAGCGTCGTCATTTAATCATTCATTCTTGAGACCCCGTGATGACGAAACACGAGATGATCGAAATGTACCAATTTCAGTGTGGTGGGAGTTCGATAGTTGTAATTTACCTGCTGATGTCAATGGTTATAGAATCACACACTGGCTAACAGAAGCTCTTAGGGCCAAAGGGATGAGGGGGCCACTTCAAATCAAGGCTTTTGGTGATGTATTGCGACTCTCAACTGCCAATCAGGAAGCTCTCTCTTCCACTGGAATACATTTGGTTCACATTCCCAATGGTGGAAAAAATCCTGGTCATGGATCTCTTCTTTTTGATCTTATGCACTGGGTGTCTAAAAATCCTCCACCAGCACATCTGTTTTTGATTACTGAGAACAGGGTTTTTGCTGATATGTTGCACCGTTTAAGATTGGATAACTACAATATCTTGCTCGCAACACCAGCAAGGGCTTCTAATGTTCTCTGCAATGCAGCAACTATAATGTGGCATTGGAATTCATTAATTAGGGGAGAAAATCTTGGTGGAAAACACTTTAATCATCCTCCTGATGGTATGGATGGTTCTTGGTATGGGCACCATAAGGTAGCTCTTGAAAACCCTTTCTTGGATGGTGAGCAGTCACAGATTGAGGAGATATCTGCTCCTATCTCAGATTTGGAATTACGTACAATTCCAAAGGCAGTTGTGAGGCAAGTTCGAGAAATATTGAACTCATACCCAAAAGGTATCTCTGTATCAGATTTTCGAGCAGAGATAGCAAAAGCTGGTATTTTCTTGAATAAAGACTACTATGGTCATAAAAAGTTTTCCCGCTTTCTTTTTTCAGTAGCAGATTTACAACTTCGGCCTGGACCTGATAAATTACTTTTTGTTCATCCCATCCCCCAAAAATGTCCTGGACCCTTTGATAGCAGTTCTGTATCATCAACAGTATCTGATTATGGTGAGGAGTTGAACCAGGTGGCTCCTTCAAAGTCAAGTGGTGAGGTCAAAAAAGTGGTAGGGGATGCAGATTTGAAGCCATCAACAGTATCTGTTGATGTTGAGATGAACCAACTGGCTACTTCAAAGTTAAGTGGTGAGGTGGAAAAGGCGTTTGAGGATGCAGAAGTGAAACCTTCAATGGATTCATCTCAGGTCCTAGAAAAGGTCCAACAGGTTGTGGATGTGGTTAATGCACATGCAACTGAGTCTCAGTTGCCTCTGAAGGAAAATGAAATTCTTAGCTCTAGTGATGTAAGTCTGAGTGTCACTGAGAAAAGTACAACTTCAGAGAATTACTCTACTGAACAAAGCAACACAGTTTCAGACAAGGATGCCTCTTCAAACGGTATTTCTGTAGAGTTAAAAGCAGAGGACAAGTATGACAAATCCACAATAAAGGAATCTGATGCAGTTTACATTCCTCATTCTTTGCCAGTTGATGAATCCGTGACTGACAAAAGCATTGGTGAAAGCACTGAAACTAACAGTAAAAATTTTGGCAAATGTCAAAGTTTCTTTGCTTGGATTAGCAGCTGGTGGCCATTCAGGAAAAATCGTAGAAACTCAAATAATTTGACTGATCAACCCAATGAGATGCTTAGCAATACTGAAGAGCCCAAGGTTTCAAACCTGAACCAGGCAACCTGTCATTCTGAAGAGTCTGAGTCATCAGATCTGAAACAAACAGTTTGTCATTCTGAAGAGTCTGAGTTCACAGAACAGAAACAAACAGTTAGTCATGCTGAGGAGCCAAAGTTATCTGAACCGAGACAGAAAGTGAATTATTTTGTAGAGCCCGAGTTATTTTCTAGTGGTACCTTTTGGAGTGACATGGAATCTTTTGTTTTTTCTGGCAAAGGATCGACTGTAGTCTCCCATTCTAAAAACAGGAAGGATCTGATGCGGAAAATTCAAAAGTATGGACCCCAGGTTCTTAGTTCTCTAAGTGAAAATGAACTCCTTGAACTGGGGAATATGTTGATATCTAAGAAAAAATGGTTGGAGGAAAGGCCTTCTCTGACTTTTCCTTTCCTGGTCACTTTAGAAGGTAGGAAGAACCCTGTGGGCCTATCACATGGTGCAACTGGTTTGAGATCTCTTTTTCTAACCAAAGAAGCACGGAGCACCTTGCAAAAATCATCGGATGGTGATATTGATAAAAGATATCAGAGTATTCCTCAAGCCGGAGTTTCTTCACCTGCCATTAAAAATAAGCACACTGAAAAGTCTAGAACTGACATATTAGCAGATATTCAGAAACTTGTGAGCGACATAGTGAGGGAACACTCAGATGGGTATAATATGGGTATGATACCAAAACTTTTTCTGGAGACGTATGGCTATCCCCTTGATGCTCAGAAGCTTGGTTATCATAAGTTGGCAGCCTTGTTACAGATTGTGCCTGGAGTGAAAGTAGAGTCTTCTTACATTTTTCCTGCTGGTCATCCCGCTTTTTCTACTGACATGGAAATGTCAATTCTGAATACTTCAGTCAACAATTCAAGTGGTGCAGTGTTGGATTCTGATAGAGAATCATCTGATTCATGCTGGAAAGAAGATCGCAAAGACGCTGCGTGGGAGGAATTAGGACCTGTCTCAGTCAGCAATCCCAAACAGAGCGGCCTGGAAACAAAATCAAGGCAAAAGGCTTTAAAGCTGGAGACCTCAATACATCCTGATTATGAACCTTCAGTTTCTGATGATGATTCTTCTGAATCCGAAGGAGATAGCTCTTGTCTAATTCAATCAGAAGGGGAGGTACGGTCAAAACATAATGTGGAAGACAGTTCTCTTTTGCAAACTCTGGAGTCATTTTACAGAAGGCAAGAAGAGGGTAGTGTTCAGTCAGAAAATACTGACACCAAAAGCAATGGTCTGACTGGTGGTTTAAATCCATCCTGGCATTCCACTCCAGGAGTGCTTTCCAAAACTCATTCAGGGGCAATGCATAAAGAGAAGCAAAGACCTCACAAGAGCTATTCATTTGTTGCTGACCCAGACTCACGAAAGAAGGACGAGCTGATCGATGGAATATTACAAAATTTGAGGAAATCAGATGAGTTGAGGATGCGAAGTTGA 3165 0.4123 MIKLLFPKNVTIISSFCSSSPLARPLLLQICHFSASSFNHSFLRPRDDETRDDRNVPISVWWEFDSCNLPADVNGYRITHWLTEALRAKGMRGPLQIKAFGDVLRLSTANQEALSSTGIHLVHIPNGGKNPGHGSLLFDLMHWVSKNPPPAHLFLITENRVFADMLHRLRLDNYNILLATPARASNVLCNAATIMWHWNSLIRGENLGGKHFNHPPDGMDGSWYGHHKVALENPFLDGEQSQIEEISAPISDLELRTIPKAVVRQVREILNSYPKGISVSDFRAEIAKAGIFLNKDYYGHKKFSRFLFSVADLQLRPGPDKLLFVHPIPQKCPGPFDSSSVSSTVSDYGEELNQVAPSKSSGEVKKVVGDADLKPSTVSVDVEMNQLATSKLSGEVEKAFEDAEVKPSMDSSQVLEKVQQVVDVVNAHATESQLPLKENEILSSSDVSLSVTEKSTTSENYSTEQSNTVSDKDASSNGISVELKAEDKYDKSTIKESDAVYIPHSLPVDESVTDKSIGESTETNSKNFGKCQSFFAWISSWWPFRKNRRNSNNLTDQPNEMLSNTEEPKVSNLNQATCHSEESESSDLKQTVCHSEESEFTEQKQTVSHAEEPKLSEPRQKVNYFVEPELFSSGTFWSDMESFVFSGKGSTVVSHSKNRKDLMRKIQKYGPQVLSSLSENELLELGNMLISKKKWLEERPSLTFPFLVTLEGRKNPVGLSHGATGLRSLFLTKEARSTLQKSSDGDIDKRYQSIPQAGVSSPAIKNKHTEKSRTDILADIQKLVSDIVREHSDGYNMGMIPKLFLETYGYPLDAQKLGYHKLAALLQIVPGVKVESSYIFPAGHPAFSTDMEMSILNTSVNNSSGAVLDSDRESSDSCWKEDRKDAAWEELGPVSVSNPKQSGLETKSRQKALKLETSIHPDYEPSVSDDDSSESEGDSSCLIQSEGEVRSKHNVEDSSLLQTLESFYRRQEEGSVQSENTDTKSNGLTGGLNPSWHSTPGVLSKTHSGAMHKEKQRPHKSYSFVADPDSRKKDELIDGILQNLRKSDELRMRS 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2074 1054 MobiDBLite consensus disorder prediction 862 881 - -
Alju06g2074 1054 ProSiteProfiles OST-type HTH domain profile. 776 852 IPR025605 -
Alju06g2074 1054 Gene3D - 771 838 IPR041966 -
Alju06g2074 1054 MobiDBLite consensus disorder prediction 915 1035 - -
Alju06g2074 1054 MobiDBLite consensus disorder prediction 552 615 - -
Alju06g2074 1054 Pfam NYN domain 58 192 IPR021139 GO:0004540
Alju06g2074 1054 ProSiteProfiles OST-type HTH domain profile. 258 329 IPR025605 -
Alju06g2074 1054 MobiDBLite consensus disorder prediction 552 581 - -
Alju06g2074 1054 MobiDBLite consensus disorder prediction 582 615 - -
Alju06g2074 1054 PANTHER LIMKAIN B LKAP 52 743 IPR024768 GO:0005777|GO:0010468
Alju06g2074 1054 CDD LOTUS 777 834 - -
Alju06g2074 1054 MobiDBLite consensus disorder prediction 453 476 - -
Alju06g2074 1054 CDD LOTUS 259 313 - -
Alju06g2074 1054 Pfam OST-HTH/LOTUS domain 260 315 IPR025605 -
Alju06g2074 1054 Pfam OST-HTH/LOTUS domain 778 835 IPR025605 -
Alju06g2074 1054 CDD PIN_limkain_b1_N_like 57 181 - -
Alju06g2074 1054 MobiDBLite consensus disorder prediction 956 1005 - -
Alju06g2074 1054 MobiDBLite consensus disorder prediction 1008 1035 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2074 Alju-ChrAlju06 46705879 46709671 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2074 59 204 C2H2 Transcription Factor Family AT5G61190 41.096 1.57e-29 125