Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2072 ATGGATTTGGACGGTTTCCGATCAATATTGGAGACGGCCGGTGTGGATGTGTGGATGTTCATCGACACCGCAATCGACATCGCTTCCATTGAGTACAACAACGAGTTAAAGCGTCGAAGGGACGGAATCGTTCAGCGTCTCTATGAAGCCACTTCAGCACCTGGACGGTGTCGGAATTGCGAAGCGATGCGGCTTAAGTCCAATGGCCACCAAGTAAGCTCTCCAATTGAGAAACAGAGCACTCCTGAACTGAAAAGAGATGCCTCGCCGGTAACGCCGCACTCTAACGGTCAAGATGACGACGATTTAGGTCTTTACGGAGGCCTTCTTGATTATGAGCAAAAGAAGATTCAAGAGATTAAAGAGCAACTTGAGGATCCTGACCAGCCTGAAGATTATGTGGTGGAGTTGCTACAGAATCTAGCGGACATGGATATTACATTCCAAGCGCTGAAGGAGACTGATATTGGGAGGCACGTTAATCGGTTGCGCAAGCATTCATCCAATGATGTTCGGAGATTGGTGAAGCTACTTGTCAGGAAATGGAAGGAGATTGTAGATGAATGGGTGAGGGTAAATCAACCAGGCGATGTTGCTTCTGTCATGGTTAATGGAGATTCGCCTATGCAGAAAAACACCCCAAACGGGCACAGTCAGATTCCTGATTTTGCGTACTCGCCTAATCTGCAGTATGGGAGTTCTAGTTCAGAGCGGAACTATTCAGAAGCAGAACCAAAGCCAAAGACGGTTTCTCGAAGAGTGCCACCAAAACCAGCAACCCCAGTGCCTATTCCTACTCCTGCTCCTCAAAACAGAAAGAAAGAAGAGAGAGATAGCAATTTTGAAGCGGACAGACTTGCTTCAGCAAGAAGGCGGCTTCAAGAGAACTACAAAGAGGCTGAAAATGCCAAAAGACAAAGAACGATCCAGGTGATGGACCTTCATGAGATCCCTAGACCCAAGAAAAATGCCTTCTTTGCAAAGAACAAGTGTAGCGGCGGTTCTCAGGCTGGGCAATGGTAA 1023 0.4741 MDLDGFRSILETAGVDVWMFIDTAIDIASIEYNNELKRRRDGIVQRLYEATSAPGRCRNCEAMRLKSNGHQVSSPIEKQSTPELKRDASPVTPHSNGQDDDDLGLYGGLLDYEQKKIQEIKEQLEDPDQPEDYVVELLQNLADMDITFQALKETDIGRHVNRLRKHSSNDVRRLVKLLVRKWKEIVDEWVRVNQPGDVASVMVNGDSPMQKNTPNGHSQIPDFAYSPNLQYGSSSSERNYSEAEPKPKTVSRRVPPKPATPVPIPTPAPQNRKKEERDSNFEADRLASARRRLQENYKEAENAKRQRTIQVMDLHEIPRPKKNAFFAKNKCSGGSQAGQW 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2072 340 MobiDBLite consensus disorder prediction 252 268 - -
Alju06g2072 340 MobiDBLite consensus disorder prediction 201 282 - -
Alju06g2072 340 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 111 197 IPR035441 -
Alju06g2072 340 Pfam TFIIS helical bundle-like domain 137 186 IPR017923 -
Alju06g2072 340 Coils Coil 283 310 - -
Alju06g2072 340 ProSiteProfiles TFIIS N-terminal domain profile. 115 189 IPR017923 -
Alju06g2072 340 SMART TFS2_5 117 188 IPR003617 GO:0005634
Alju06g2072 340 CDD TFIIS_I 114 187 - -
Alju06g2072 340 MobiDBLite consensus disorder prediction 205 240 - -
Alju06g2072 340 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 114 194 IPR035441 -
Alju06g2072 340 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 336 IPR044790 -
Alju06g2072 340 MobiDBLite consensus disorder prediction 68 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2072 Alju-ChrAlju06 46682050 46684080 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Alju06g2072 Med26 3.3e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2072 06 46682050 46684080 Alju06g2072 06 46682050 46684080 ECH