Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2046 ATGAAACCTATTAAGTCCTCCACTCGCTATCACTTCTCTTTCTTCATATTCTTCCCCCTCGCCGTTCTTTCTCTCCAATCTCCCTCTTCATCCTCTGCTTTTTCAGCCTTCCGAGATTCCCCTCAACCATTAATCAACTTCAAGTCCTCTCTCTCAGACCAATCTCTGCTCCAAAACTGGCTCCCAAACCAAAACCCATGTTCTTTCACTGGGATTTCCTGCAAGCAAACCGGGTTTTATTCCATAGACCTCAGCTTCATCTCCTTGAACACAAACTTCAGTGTCGTCTCTGTCAATCTTCTCACACTCGACCATCTGGAAGCTCTTAACATCAAGTTCACCAATCTTACTGGTACCATTTCTGTGCTCCCGCATGCGTTCCAGTGTGGTGTCTCATTGAGCAGTATAGATCTATCTCACAACAAATTGTCTGGTTCTGTTTCGGACATATCCTATCTCAGCTCCTGTTCAAGTTTGAAATCTCTGAACCTTTCTAATAATGATTTTGAGTTTTCTACGAAAGATTCCACCGGCTTGAGACTCAATCTCCAAGTACTGGATATTTCTTTCAATAATGATATTTCCGGTCCAAATGTTCTCCGTTGGATCTTATCTCCAGGTTGCGACGATATGCAAGTGTTGGCTCTCAGAGGAAACAAGCTCACCGGAGAAATCAATTTCTCAAACTGCCAGAAATTGCAGCATTTGGATCTTTCTGCTAATAATTTCTCCGCCGCTATTCCTTCGTTCGGTGAATGTTCGGCGTTACAGTACCTTGATATCTCTGCTAACAAGTATTTCGGCGACATTGGCCTCGCACTCTCTCCCTGCAAGAAGCTCAGCCACCTCAACGTTTCAAGCAACCAGTTCGCCGGTCCGGTTCCGTCGCTTCCGATGGACTCTCTGCAGTTCCTTTATCTCGCAGGCAACGAGTTCCTTGGTCAGATTCCAGAACGACTGGCGGATTTGTGCACCACTATCGTCGAGCTCGATCTTTCCTCGAACTCCCTCACCGGTGCGATTCCGCGCGGTCTTAGCGCCTGTTCTTCGCTGGAATTGTTTGATATATCTAAGAACCAGTTTTCCGGTGAGTTACCGATTGAAGTTTTCGTGGAGATGAGCAGCTTGAAGAAGCTAGTTCTCGCATTCAATAATTTCGATGGTATTTTTCCGGATAATCTGTCGAAGCTCACAAGCTTGGAATCGTTGGATTTGAGTTCCAATAACTTCTCGGGGTCAATACCTGGAGGGCTATGTCAAGATCCTAGGAACAATTTGAAAGAATTATTCCTGCAGAATAATGGGCTCACGGGTTTCATTCCACACTCAATCAGCAACTGTTCTCAGCTTGTTTCATTAGATTTAAGTGTCAACTTCTTGAAGGGGACTATCCCTTCCAGCTTGGGGTCTCTTTCGAAGCTTCGTGATTTGATTATGTGGCTAAATCAGCTTGAAGGTGAAATACCTCAAGAGCTCATGTACATTAAGACCCTTGAGAATTTGCTCTTGGACTTCAATGAGCTCACAGGGAATATTCCTTCTGGTTTAAGAAACTGTACCTCCTTGAATTGGATCTCCTTGTCTAATAACAGATTGAGCGGGGAGATTCCTGCTTGGATTGGCCAACTTTCCAATCTTGCAATCCTGAAGCTGAGCAATAACTCATTCTCTGGGAGGATTCCACCGGAACTTGGTGACTGTCGCAGTTTGATCTGGTTGGATCTAAATACAAATTCCCTTAATGGGTCAATTCCTCCTGAATTGTTCAAGCAATCTGGCAAAATCACTGTGGATTTCATAAGTGGGAAAACTTATGTGTATATCAAGAATGATGGCAGCGAGGCATGCCATGGAGCTGGGAATTTGCTAGAGTTTGCTGGGATCAATTCTGAGCAGTTGAACAGAATTTCTACAAGGAATCCCTGTAACTTCACTAGAGTTTATCGCGGTAATCTCCAACCTACATTTAGTAATAATGGGTCTATGATTTTTTTGGATCTTTCATACAATATGTTGTCGGGTAGTATACCGAAAGAGATTGGGAACTTGTACTATGTAGATATTCTGAATTTGGGTCACAACAACCTATCTGGAAATATTCCAGAAGAGCTTGGGAAGGCAATAAAAATGGACATACTTGATCTCTCATGGAATAGGCTTGAAGGACAAATTCCACAGTCCTTGACTGGCCTTTCCATGCTCTCTGAAATTGACCTGTCAAACAACTTTCTATGGGGAGTGATTCCTGACTCTGCTCAGTTTGTAACCTTTTCTCCCAACAGTTTCGCAAATAATTCTGGTCTCTGCGGATACCCTCTTGCTCAATGTGGGGGACACTCAGGATCAGGTTCAGGTGCTCAACATCAGAAATCTCGCAGGAGGCAAGCATCTCTTGCAGGTAGTTTGGCTTTGGGATTGCTATTCACCCTATTCTGCACCTTTGGTGCAATTATAATTGCCCTGGAGACCAGAAAGAGGAGGAAGAAGAAGGAAGCTGCACTAGATGCCTACATGGAAAACAATTCTCATTCAGGTACTGGCAACAATACAAACTGGAAGCTTACGAGTGCCCGTGAAGCACTCAGCATAAACCTTGCAGCATTCGAGAAGCCCATCCGGAAACTCACCTTTGCAGATCTCCTTGAAGCTACTAATGGCTTCCACAATGATAGTCTTATTGGTTCTGGTGGTTTTGGTGATGTCTACAAGGCTCAACTGAAGGATGGAAGTGTTGTGGCTATCAAGAAACTGATACGTATTAGTGGTCAAGGTGACAGGGAATTCACAGCTGAAATGGAAACCATTGGCAAAATCAAGCATCGCAACCTAGTTCCCCTTCTGGGTTACTGCAAGGTAGTGGAAGAGAGACTCCTAGTTTACGAATTCATGAAATACGGAAGTCTAGAAGACGTTTTGCATGACCGGAAGAAAGCCAGGGTCAAGCTGAACTGGGCTGTAAGAAGGAAAATCGCCATTGGGGCTGCTAGGGGATTGGCTTTTCTTCACCATAATTGCATCCCACACATCATTCATAGAGACATGAAGTCCAGTAATGTATTGCTGGATGAGAATTTGGAATCCAGAGTCTCTGATTTCGGCATGGCTAGGCTTATGAGTGCTGTGGATACCCATTTAAGTGTCAGCACACTAGCAGGCACCCCTGGCTATGTTCCTCCTGAATATTATCAGAGCTTTAGATGTTCCACTAAAGGTGATGTATATAGTTACGGTGTAGTTTTACTGGAGCTGCTAACGGGGAGACGCCCGACGGATTCAGCGGATTTTGGCGACGACAATAATCTTGTGGGATGGGTTAAACAACATGTAAAACTGAGAGTGAATGAAGTTTTTGATCCTGAACTCTTGAAAGAGGATCCTAGTCTTGAGAATGAGCTTCAACAACACTTGAAAGTTGCTTGTGCTTGTTTGGATGATCGACCGTGGCGGCGTCCCACAATGATTCAAGTCATGGCAATGTTCAAGGAAATCCAAGCTGGGTCTGGCATTGATTCCCAATCCACCATAGACACTGAAGATGGAGGTTTTGGTTCAGTTGAAATGGTAGATATGAGCATTAAAGAAGCCCCCTGA 3591 0.4425 MKPIKSSTRYHFSFFIFFPLAVLSLQSPSSSSAFSAFRDSPQPLINFKSSLSDQSLLQNWLPNQNPCSFTGISCKQTGFYSIDLSFISLNTNFSVVSVNLLTLDHLEALNIKFTNLTGTISVLPHAFQCGVSLSSIDLSHNKLSGSVSDISYLSSCSSLKSLNLSNNDFEFSTKDSTGLRLNLQVLDISFNNDISGPNVLRWILSPGCDDMQVLALRGNKLTGEINFSNCQKLQHLDLSANNFSAAIPSFGECSALQYLDISANKYFGDIGLALSPCKKLSHLNVSSNQFAGPVPSLPMDSLQFLYLAGNEFLGQIPERLADLCTTIVELDLSSNSLTGAIPRGLSACSSLELFDISKNQFSGELPIEVFVEMSSLKKLVLAFNNFDGIFPDNLSKLTSLESLDLSSNNFSGSIPGGLCQDPRNNLKELFLQNNGLTGFIPHSISNCSQLVSLDLSVNFLKGTIPSSLGSLSKLRDLIMWLNQLEGEIPQELMYIKTLENLLLDFNELTGNIPSGLRNCTSLNWISLSNNRLSGEIPAWIGQLSNLAILKLSNNSFSGRIPPELGDCRSLIWLDLNTNSLNGSIPPELFKQSGKITVDFISGKTYVYIKNDGSEACHGAGNLLEFAGINSEQLNRISTRNPCNFTRVYRGNLQPTFSNNGSMIFLDLSYNMLSGSIPKEIGNLYYVDILNLGHNNLSGNIPEELGKAIKMDILDLSWNRLEGQIPQSLTGLSMLSEIDLSNNFLWGVIPDSAQFVTFSPNSFANNSGLCGYPLAQCGGHSGSGSGAQHQKSRRRQASLAGSLALGLLFTLFCTFGAIIIALETRKRRKKKEAALDAYMENNSHSGTGNNTNWKLTSAREALSINLAAFEKPIRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAQLKDGSVVAIKKLIRISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVVEERLLVYEFMKYGSLEDVLHDRKKARVKLNWAVRRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLLDENLESRVSDFGMARLMSAVDTHLSVSTLAGTPGYVPPEYYQSFRCSTKGDVYSYGVVLLELLTGRRPTDSADFGDDNNLVGWVKQHVKLRVNEVFDPELLKEDPSLENELQQHLKVACACLDDRPWRRPTMIQVMAMFKEIQAGSGIDSQSTIDTEDGGFGSVEMVDMSIKEAP 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2046 1196 FunFam serine/threonine-protein kinase BRI1-like 2 848 962 - -
Alju06g2046 1196 Gene3D Ribonuclease Inhibitor 44 776 IPR032675 -
Alju06g2046 1196 Pfam Brassinosteroid receptor island domain 593 657 IPR045381 -
Alju06g2046 1196 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 654 776 - -
Alju06g2046 1196 Pfam Leucine rich repeat 365 410 IPR001611 GO:0005515
Alju06g2046 1196 SUPERFAMILY Protein kinase-like (PK-like) 869 1160 IPR011009 -
Alju06g2046 1196 Gene3D - 598 658 - -
Alju06g2046 1196 Pfam Leucine rich repeat N-terminal domain 44 74 IPR013210 -
Alju06g2046 1196 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1009 1021 IPR008271 GO:0004672|GO:0006468
Alju06g2046 1196 SUPERFAMILY RNI-like 299 588 - -
Alju06g2046 1196 PRINTS Leucine-rich repeat signature 133 146 - -
Alju06g2046 1196 PRINTS Leucine-rich repeat signature 397 410 - -
Alju06g2046 1196 Gene3D Phosphorylase Kinase; domain 1 847 962 - -
Alju06g2046 1196 Gene3D Transferase(Phosphotransferase) domain 1 963 1165 - -
Alju06g2046 1196 ProSitePatterns Protein kinases ATP-binding region signature. 893 916 IPR017441 GO:0005524
Alju06g2046 1196 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 209 422 - -
Alju06g2046 1196 PANTHER RECEPTOR-LIKE PROTEIN 55 474 1164 - -
Alju06g2046 1196 ProSiteProfiles Leucine-rich repeat profile. 132 154 IPR001611 GO:0005515
Alju06g2046 1196 SUPERFAMILY L domain-like 653 774 - -
Alju06g2046 1196 SMART serkin_6 887 1160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2046 1196 ProSiteProfiles Protein kinase domain profile. 887 1163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2046 1196 Pfam Protein kinase domain 887 1158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju06g2046 1196 SMART LRR_typ_2 543 567 IPR003591 -
Alju06g2046 1196 SMART LRR_typ_2 397 421 IPR003591 -
Alju06g2046 1196 SMART LRR_typ_2 299 323 IPR003591 -
Alju06g2046 1196 SMART LRR_typ_2 731 754 IPR003591 -
Alju06g2046 1196 SMART LRR_typ_2 568 591 IPR003591 -
Alju06g2046 1196 FunFam Serine/threonine-protein kinase BRI1-like 1 600 657 - -
Alju06g2046 1196 Pfam Leucine Rich Repeat 425 447 IPR001611 GO:0005515
Alju06g2046 1196 FunFam Brassinosteroid LRR receptor kinase 963 1165 - -
Alju06g2046 1196 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 423 601 - -
Alju06g2046 1196 CDD STKc_IRAK 893 1163 - -
Alju06g2046 1196 SUPERFAMILY L domain-like 56 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2046 Alju-ChrAlju06 46038256 46041846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2046 30 1196 Receptor kinase-like Gene Family AT4G39400 68.085 0.0 1538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Alju06g2046 Pkinase 7.5e-45 CL0016