Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2028 ATGGACTTGACCGCGAAGCTTCATCACCTTGAGCTCGGTTCAAGCTTCCTCACCGGCACGGTCATTTTGGACACACGGAAAGCCGCTGTACGACCTTACATTCGGCCTGCTTCAAATCGTGTGGTTTCTCAAACCCTTAGAGGTAATACTAATTTAATTAAATCCACTCAATTTATTGGTCCTAGAAGAGCGAATTTGAGTATCGCTGCTAGTTCATCTTCGGTTGCTGTCGAGACATCGGCGGCAGAATCCACTACCGAAGAGGACATTGAGTCTTTGTTTTCGGACTCTTCGGTTGATAAATATGAGAATAAACGTGTGAATAGGCAATCCAATAGCGGTGCGTCGAGCATTTCATCTGGTGTGAGGTTAGAGAATGTGAGCAAAATCTACAAGGGCGTCACTGTCTTGAAAGATGTTAGTTGGGAAGTGAAAAAAGGTGAAAAAGTGGGATTGGTTGGTGTAAATGGTGCAGGGAAGACGACACAGATGAGAATTATTGCTGGTCAGGAGGAACCAGATTCGGGGAATGTAATAAAAGCCAAACCAAATATGAAAATTGCTTTTCTGAGTCAGGAATTTGAGGTATCTCTAAGTAGGACCGTGAGGGAGGAATTTCTAACTGCATTTAAGGAGGAGATGGGGATAGCAGGGAAGTTGGAGAAGGTGCAGAAGGCACTCGAGGGTGCTGTGAACGATTTAGAATTGATGGGGAGGCTTTTAGATGAGTTTGATTTGCTTCAGAAAAAGGCCCAGGCAGTGAACTTGGATGCAGTAGATGCGAAGGTGAGCAAATTGATGCCAGAACTTGGGTTTTCTTCAGATGATTCAGACAGGCTGGTGGCGTCATTTAGCAGTGGATGGCAGATGAGGATGTCCCTGGGAAAGATTTTACTTCAGGAGCCAGATTTATTACTGTTGGATGAACCGACAAATCACCTTGACCTTGACACCATTGAGTGGCTTGAAGGGTATCTCAACAAGCAAGAAGTGCCTATGGTCATCATTTCCCATGACAGAGCTTTTCTTGATCAACTGTGTACAAAAATTGTGGAAACTGACATGGGTGTATCCAGAACATATGAGGGCAATTATTCCCAGTATGTAGTCTCAAAGGCAGCATGGACTGAAGCACAGTATGCAGCATGGGAGAAGCAGCAGAAAGAAATTGAGCAGACAAAGGACTTAATAAACAGGTTAGGTGCAGGAGCGAATTCTGGCCGTGCTTCATCTGCTGAGAAGAAGTTGGAGAGACTTGAAGAAGAGGAGCTAGTAGAGAAGCCATTTCAAAGGAAACAAATGAAAATCAGGTTCCCTGAGCGTGGAAGAAGTGGAAGATCCATTGTAACAATTAAGAACTTGGAATTTGGCTTTGAGGATAAAGTGCTCTTCAAGAAGGCAAATCTTACAATTGAAAGGGGAGAAAAAATTGCCATTATTGGTCCAAATGGATGTGGCAAGAGTACTTTGCTGAAGGTCATAATGGGTTTAGAGAAGCCAAATGGGGGTGAAGTTGTGCTTGGAGAGCACAATGTATTGCCAAACTATTTTGAGCAAAATCAGGCTGAGGCACTTGATCTGGGGAAGACAGTACTTGAGACAATTGAAGAAGCTGCTGAGGACTGGAAGATTGATGATATTAAAGGACTTCTTGGGCGTTGTAATTTCAAATCTGATATGCTTGACCGTAAAGTTTCCCTATTGAGTGGTGGTGAGAAGGCTCGTCTGGCTTTCTGCAAATTTATGGTAACACCGTCAACCCTGCTTGTGTTGGATGAACCAACCAATCACTTGGATATACCTTCTAAAGAAATGCTTGAGGAGGCAATAAATGAGTACCAGGGCACTGTTATTACAGTGTCTCATGATCGATACTTCATAAAGCAGATAGTTAATAGAGTCATAGAAATTAAAGATGGAACTATACAGGATTATGCTGGTGACTATAATTACTATTTGGAAAAGAATCTTGATGCTAGAGCTAGAGAGCTTGAACGTGAGGCTGAACTTGACGTGAAAGCTCCGAAAGTGAAAGCCAAATCCAAGATGTCAAAGGCTGAGAAAGAAGCGCGGAAGAAACAGAAGGTGCAAGCTTTTCAGGCAGCAAAGCAGAAATCTAAAGGGTTAAAAAATGCCAAGAGATGGAATTGA 2151 0.43 MDLTAKLHHLELGSSFLTGTVILDTRKAAVRPYIRPASNRVVSQTLRGNTNLIKSTQFIGPRRANLSIAASSSSVAVETSAAESTTEEDIESLFSDSSVDKYENKRVNRQSNSGASSISSGVRLENVSKIYKGVTVLKDVSWEVKKGEKVGLVGVNGAGKTTQMRIIAGQEEPDSGNVIKAKPNMKIAFLSQEFEVSLSRTVREEFLTAFKEEMGIAGKLEKVQKALEGAVNDLELMGRLLDEFDLLQKKAQAVNLDAVDAKVSKLMPELGFSSDDSDRLVASFSSGWQMRMSLGKILLQEPDLLLLDEPTNHLDLDTIEWLEGYLNKQEVPMVIISHDRAFLDQLCTKIVETDMGVSRTYEGNYSQYVVSKAAWTEAQYAAWEKQQKEIEQTKDLINRLGAGANSGRASSAEKKLERLEEEELVEKPFQRKQMKIRFPERGRSGRSIVTIKNLEFGFEDKVLFKKANLTIERGEKIAIIGPNGCGKSTLLKVIMGLEKPNGGEVVLGEHNVLPNYFEQNQAEALDLGKTVLETIEEAAEDWKIDDIKGLLGRCNFKSDMLDRKVSLLSGGEKARLAFCKFMVTPSTLLVLDEPTNHLDIPSKEMLEEAINEYQGTVITVSHDRYFIKQIVNRVIEIKDGTIQDYAGDYNYYLEKNLDARARELEREAELDVKAPKVKAKSKMSKAEKEARKKQKVQAFQAAKQKSKGLKNAKRWN 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2028 716 ProSitePatterns ABC transporters family signature. 568 582 IPR017871 GO:0005524|GO:0016887
Alju06g2028 716 Coils Coil 676 696 - -
Alju06g2028 716 PANTHER ABC TRANSPORTER ATP-BINDING SUBUNIT 121 707 - -
Alju06g2028 716 FunFam ABC transporter ATP-binding protein 409 680 - -
Alju06g2028 716 Pfam ABC transporter 137 312 IPR003439 GO:0005524
Alju06g2028 716 Pfam ABC transporter 465 596 IPR003439 GO:0005524
Alju06g2028 716 Coils Coil 402 422 - -
Alju06g2028 716 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 449 664 IPR003439 GO:0005524
Alju06g2028 716 CDD ABCF_EF-3 449 641 - -
Alju06g2028 716 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 122 380 IPR003439 GO:0005524
Alju06g2028 716 Gene3D - 411 678 IPR027417 -
Alju06g2028 716 MobiDBLite consensus disorder prediction 675 716 - -
Alju06g2028 716 FunFam Putative ABC transporter ATP-binding component 122 407 - -
Alju06g2028 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 429 656 IPR027417 -
Alju06g2028 716 ProSitePatterns ABC transporters family signature. 284 298 IPR017871 GO:0005524|GO:0016887
Alju06g2028 716 MobiDBLite consensus disorder prediction 675 696 - -
Alju06g2028 716 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 391 IPR027417 -
Alju06g2028 716 Pfam ABC transporter 351 438 IPR032781 -
Alju06g2028 716 CDD ABCF_EF-3 122 352 - -
Alju06g2028 716 Gene3D - 119 404 IPR027417 -
Alju06g2028 716 SMART AAA_5 146 356 IPR003593 GO:0016887
Alju06g2028 716 SMART AAA_5 473 641 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2028 Alju-ChrAlju06 45730524 45737095 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2028 446 666 Calmodulin-binding Proteins AT2G36910 26.316 3.02e-14 75.1