Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1953 ATGGCTTCACCACTCCGCTGCTCAGAACTCAGAAGCCGGCTCACCCTTCTTCCTCTCTCTCTTACTAAGGACTCTTCTAGAGACATGACGCAGCAAAATGTGGTGGTTTCCGACGCCAATTCCAGAATCAACCTTCAGGCCTTAACCGCCGCCGTCTCTAACTCCTTCAATTTCACCACCGCACCTCACAAGCCCCTCGCAGCCCCAGCCGGTGGCGCCGTCGCCGGCTTCATCTCCATTTCGAGGAAGAAGTTCCTGAAGACCCTGGACATCAATGGAGCCGCCAAAATCAATTCCTGGGTCGACTCCATGCGCGCCTCCTCCCCCACCCACCGCCACTCCTCCACCACCACCACCACTACTCTCACCACCTCCCCTATTGACCCACAACACAACTCTTGGATCCTTCATCACCCATCTGCATTAGATATGTTTGAGCAAATCATCGAAGCTTCCAGAGGAAAGCAGATAGTCGTGTTCCTTGACTACGACGGCACGCTCTCCCCCATCGTCGACGACCCTGATCGTGCTTTCATGTCCGATGCCATGAGGAAGACGGTGAGAAACCTCGCCAGATGTTTTCCGACCGCCATAGTAAGCGGCAGATGCAGAGACAAGGTGTACAGCTTTGTTCGGTTGGCAGAGCTCTATTATGCAGGGAGCCATGGGATGGACATTAAAGGACCAACTAAAATCTCTAAATATAATAAAGACAGTAAAGCGATTCTGTTTCAGCCTGCCTGTGAATTTTTACCCATGATGGACAAGGTGTATAAGCTGTTAGTTGAGAAAACAAGTTCAACTCCAGGAGCTAAAGTGGAGAACAATAAGTTCTGTGTATCTGTTCATTTTCGCTGTGTTGATGAAAAGAAATGGAGCGAACTGGCAAACCAGGTTAGATCAGTGTTAAAGGAGTACCCCAAGCTTCGTCTTACTCAGGGAAGGAAGGTACTTGAGATTCGTCCCCCTATTAAATGGGACAAAGGAGAGGCCCTGGAATTTTTGTTAGAGTCACTTGGTTTTGCCAACTGTACAGACGTCTTCCCAGTTTATATTGGCGACGATCGATCCGATGAAGATGCGTTCAAGAAACTAAGAGAGAGAGGACAAGGCTATGGCATTCTTGTATCCAAATTTCCGAAAGATACGAGTGCCTCTTACTCTTTACAAGAACCCGACGAGGTGATGGATTTTCTGCAGCGATTGGTGGAGTGGAAGAGAGTTTCAGTGAGGGCTCGTTGCAGGCTAAGAGGAACAAGACAAATATGTAAGGATAAAGCAAAAGCCATAGAAAGACAGAAGTGTCTTTCTTAA 1314 0.4848 MASPLRCSELRSRLTLLPLSLTKDSSRDMTQQNVVVSDANSRINLQALTAAVSNSFNFTTAPHKPLAAPAGGAVAGFISISRKKFLKTLDINGAAKINSWVDSMRASSPTHRHSSTTTTTTLTTSPIDPQHNSWILHHPSALDMFEQIIEASRGKQIVVFLDYDGTLSPIVDDPDRAFMSDAMRKTVRNLARCFPTAIVSGRCRDKVYSFVRLAELYYAGSHGMDIKGPTKISKYNKDSKAILFQPACEFLPMMDKVYKLLVEKTSSTPGAKVENNKFCVSVHFRCVDEKKWSELANQVRSVLKEYPKLRLTQGRKVLEIRPPIKWDKGEALEFLLESLGFANCTDVFPVYIGDDRSDEDAFKKLRERGQGYGILVSKFPKDTSASYSLQEPDEVMDFLQRLVEWKRVSVRARCRLRGTRQICKDKAKAIERQKCLS 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1953 437 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 75 411 IPR044651 GO:0004805|GO:0005992
Alju06g1953 437 SUPERFAMILY HAD-like 158 406 IPR036412 -
Alju06g1953 437 NCBIfam trehalose-phosphatase 155 403 IPR003337 GO:0003824|GO:0005992
Alju06g1953 437 Pfam Trehalose-phosphatase 160 392 IPR003337 GO:0003824|GO:0005992
Alju06g1953 437 CDD HAD_TPP 158 396 - -
Alju06g1953 437 FunFam Trehalose 6-phosphate phosphatase 157 242 - -
Alju06g1953 437 Gene3D - 261 415 IPR023214 -
Alju06g1953 437 Gene3D - 157 242 IPR023214 -
Alju06g1953 437 FunFam Trehalose 6-phosphate phosphatase 253 412 - -
Alju06g1953 437 NCBIfam HAD-IIB family hydrolase 159 367 IPR006379 -
Alju06g1953 437 MobiDBLite consensus disorder prediction 106 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1953 Alju-ChrAlju06 44404037 44407570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1953 146 365 Trehalose Biosynthesis Gene Families AT1G70290 28.879 1.25e-09 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g1953 06 44404037 44407570 Alju06g1953 06 44404037 44407570 ECH