Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1939 ATGGGACGAATGCAATCTCTGCGGACCAAAGCAGCTCACTTCGTATCGGATCTCACCACTGTCCTACTCAATCCAATCTCTGACAAACTCTCTAAACCCCCTCCCCCTCCTTCTGAAGGAGTGGACATATCAAATGTGTCTGATTCGGAGTCAGCTAATCGAGATGGCAGCCAGAATTTAACTGATGGGCCTGATACTTCATCCTTCACTTCATTCCTCTACTCGTTCTTGTCTTCAGATTCTAGAGACAATGTAAATTCAGAAGGGCAAAATGACACTAGAAGTTGTGCTGATGTCCCTCCGTCGGACTCAACCATGAAGGAAAATAGTGGAAAGAAAAGTTTGTTTTCTAGGGGTAGGCAAACACTTGGTAGAGCTATCAACCAAGCTGCAAGAATCACGAGATTCCGATCTCAAGAGCCGAAAGATGAGACTGAAATGAAATTGGATGATGGACATGGTTCTAGATTATCTGATGTTGAGATGAGGCATGTTAAGCCTGAGGGGGAGGAGCATACATCTTTGATTGATCTACCAGAACCTTCTGAACCTTCAGCGCTCCTTTCAGAGAAAATGAGAAATATTATTTATGCTTCTCTTCCTGCTCTTATTCATGGGAGGAAATGGATGCTGCTATACAGTACACAGAGGCATGGGATATCACTTTTGACACTGTACAGGAGAAGCATGCTTTGGCCTGGCTTGAGTTTGCTGGTTGTTGGAGATCGTAAAGGTGCAGTTTTTGGTGGCTTGGTTGAAGCACCACTAAAGCCATCAGGCAAAAGATATCAGGGAACAAGTAATACGTTTGTCTTCACAAACACCTCTGGCCATCCTACTGTGTATCGCCCAACAGGGGTAAACCGCTATTTCACACTATGCTCCAATGACTTTCTAGCCATTGGTGGGGGAGGTCATTTTGCGCTTTATTTGGATGGTGATCTATTGAACGGCTCTAGTTCTGTCTCAGAAACTTATGGAAATCCTTGCCTTGCGCATTCTCATGACTTTGAAGTTAAGGAAGTAGAGTTGTGGGGCTTTGTATATAGTTCAAAATATGAAGAAGTTTTGGCATTAAGCCGAACAGAGGCGCCTGGAATCTGCCGATGGTAG 1113 0.4429 MGRMQSLRTKAAHFVSDLTTVLLNPISDKLSKPPPPPSEGVDISNVSDSESANRDGSQNLTDGPDTSSFTSFLYSFLSSDSRDNVNSEGQNDTRSCADVPPSDSTMKENSGKKSLFSRGRQTLGRAINQAARITRFRSQEPKDETEMKLDDGHGSRLSDVEMRHVKPEGEEHTSLIDLPEPSEPSALLSEKMRNIIYASLPALIHGRKWMLLYSTQRHGISLLTLYRRSMLWPGLSLLVVGDRKGAVFGGLVEAPLKPSGKRYQGTSNTFVFTNTSGHPTVYRPTGVNRYFTLCSNDFLAIGGGGHFALYLDGDLLNGSSSVSETYGNPCLAHSHDFEVKEVELWGFVYSSKYEEVLALSRTEAPGICRW 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1939 370 MobiDBLite consensus disorder prediction 26 66 - -
Alju06g1939 370 MobiDBLite consensus disorder prediction 42 66 - -
Alju06g1939 370 Pfam TLD 211 347 IPR006571 -
Alju06g1939 370 ProSiteProfiles TLDc domain profile. 186 348 IPR006571 -
Alju06g1939 370 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 16 349 - -
Alju06g1939 370 SMART 109ultra 185 348 IPR006571 -
Alju06g1939 370 MobiDBLite consensus disorder prediction 80 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1939 Alju-ChrAlju06 44050446 44054850 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1939 208 355 EF-hand Containing Proteins AT5G06260 29.747 1.24e-13 69.3