Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1924 ATGCTTTTCCACATTCTGAGCAAAAACTCGACCACCAAACCGTTTCGTCCTCCTCCAGCCAATTCGAGAATTCCAATTTCTCGAACCTCATCCTCGTATTGCTCTGACTCCCTCCTTGATCCTTTGTTCTCTACTCTATACGCTTCATTTACTCTCGCACTTTCGTTCCTTCATTCCTGTTTATCTTTCCCTGCCCTTCTCCTCTCTCTACTTTCAGAGAGAGCGAAGCGGCCTAGGTTGAGGGAAAGTCCAGCACTAACAGTCGCAGAAGCTTGTAGGATTTTGACAAAAGGCTTCTTAGGTCATATAGTAGGTTGGCTAGTGGTGTTTGCAATATTTGGTTCTGGGTCTTCTGCTGGCCACGTGTTACTAATCACTAATTGTACTAACAATGAATATTGGATGGCTGTTACACCTTTCGGAAGCACATCTGTTGCACAATGGGGAGTTTGTCCTCAATTTTTCTCGAGATCCTGTTTGACTGGCAAAAGTGTATCATCTGGATACAATGTTTCAAGCAGGGTTAGTTTTATGTCTTCTGTGAGTTCAAATTTTTTGTCTCGGGGTTCCTTGCACCTCCTATTTGGCCTGGATTCATCTCAAACATTACATCGTCGCAGGGGATCAAGGTTGATAGTTAGAGCAGATACAGATTACTATTCTGTCCTTGGGGTGTCAAGAAATGCCAGTAAATCTGAAATTAAGAGCGCTTATCGTAAACTTGCCCGGAATTATCACCCAGATGTGAACAAAGAAGCTGGAGCAGAACAGAAATTTAAGGAAATCAGTAATGCATACGAGGTCTTATCAGATGATGAGAAGAGATCCATATATGACACATACGGAGAGGCTGGGCTTAAAGGTTCTGGAATGGGCATGGGAGATTTCAGCAATCCTTTTGATCTATTTGAGACACTGTTTGAGGGCATGGGCATGAATCGCGGCATGAACAACAGAGGCTCTTGGAATGGAGCTGTTGATGGTGAAGATGAATATTACAGTCTTGTCTTGAACTTTAAAGAAGCAGTTTTTGGGGTAGAAAAAGAGATAGAGATAAGCCGACTAGAGAATTGTGGAACTTGTAATGGAACAGGAGCCAAGCCCGGGACCACGCCAACCAGATGTAGCACCTGTGGAGGCCAAGGCCGGGTTGTCTCGTCAACAAGGACACCCTTGGGTATTTTCCAGCAGTCAATGATATGCTCTGCATGTAACGGAGCCGGGGAAATTTCAACACCTTGCAGTGCATGTTCTGGGGATGGTCGACTGAGGAGAACAAAGCGGATAAGCCTGAAAGTTCCACCTGGTGTGGATTCTGGTAGCCGTTTAAGGGTCCGAAATGAAGGGAATGCCGGAAGACGAGGTGGTTCTCCGGGTGACCTCTTTGTTGTCATTGAGGTCATTCCAGATCCTGTCCTCAAGCGTGACGACACTAACATCCTCTACACTTGTAAGGTGTCATACATTGATGCAATATTGGGAACTACAATCAAGGTCCCTACTGTAGACGGAACAGTTGATCTAAAAATCCCGGCTGGGACCCAACCCAACACGACACTCGTCATGGCAAAGAAAGGTGTCCCCTTTCTGAATAAAAGCAACATGAGGGGTGATCAATTGGTTCGTGTGCAAGTTGAAATACCTAAAAAAATCAACAGTGAAGAAAGGAAGCTTATTGAAGAGCTTGCTGATTTAAGCAAAGGCAAGGCTGCGGCAGGTAAAAGATAA 1728 0.4491 MLFHILSKNSTTKPFRPPPANSRIPISRTSSSYCSDSLLDPLFSTLYASFTLALSFLHSCLSFPALLLSLLSERAKRPRLRESPALTVAEACRILTKGFLGHIVGWLVVFAIFGSGSSAGHVLLITNCTNNEYWMAVTPFGSTSVAQWGVCPQFFSRSCLTGKSVSSGYNVSSRVSFMSSVSSNFLSRGSLHLLFGLDSSQTLHRRRGSRLIVRADTDYYSVLGVSRNASKSEIKSAYRKLARNYHPDVNKEAGAEQKFKEISNAYEVLSDDEKRSIYDTYGEAGLKGSGMGMGDFSNPFDLFETLFEGMGMNRGMNNRGSWNGAVDGEDEYYSLVLNFKEAVFGVEKEIEISRLENCGTCNGTGAKPGTTPTRCSTCGGQGRVVSSTRTPLGIFQQSMICSACNGAGEISTPCSACSGDGRLRRTKRISLKVPPGVDSGSRLRVRNEGNAGRRGGSPGDLFVVIEVIPDPVLKRDDTNILYTCKVSYIDAILGTTIKVPTVDGTVDLKIPAGTQPNTTLVMAKKGVPFLNKSNMRGDQLVRVQVEIPKKINSEERKLIEELADLSKGKAAAGKR 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1924 575 Pfam DnaJ C terminal domain 333 548 IPR002939 -
Alju06g1924 575 CDD DnaJ_zf 358 421 IPR001305 GO:0031072|GO:0051082
Alju06g1924 575 FunFam Putative Mitochondrial DnaJ chaperone 415 463 - -
Alju06g1924 575 SUPERFAMILY Chaperone J-domain 214 312 IPR036869 -
Alju06g1924 575 PRINTS DnaJ domain signature 254 274 IPR001623 -
Alju06g1924 575 PRINTS DnaJ domain signature 220 238 IPR001623 -
Alju06g1924 575 PRINTS DnaJ domain signature 274 293 IPR001623 -
Alju06g1924 575 PRINTS DnaJ domain signature 238 253 IPR001623 -
Alju06g1924 575 CDD DnaJ_C 329 551 - -
Alju06g1924 575 NCBIfam molecular chaperone DnaJ 218 564 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Alju06g1924 575 Gene3D DnaJ domain 215 319 IPR036869 -
Alju06g1924 575 MobiDBLite consensus disorder prediction 1 23 - -
Alju06g1924 575 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 345 424 IPR036410 -
Alju06g1924 575 FunFam Chaperone protein dnaJ A6 chloroplastic 215 318 - -
Alju06g1924 575 ProSitePatterns Nt-dnaJ domain signature. 259 278 IPR018253 -
Alju06g1924 575 CDD DnaJ 218 271 IPR001623 -
Alju06g1924 575 FunFam Chaperone protein dnaJ 1, mitochondrial 468 575 - -
Alju06g1924 575 Pfam DnaJ domain 218 279 IPR001623 -
Alju06g1924 575 SUPERFAMILY HSP40/DnaJ peptide-binding domain 326 480 IPR008971 GO:0006457|GO:0051082
Alju06g1924 575 Pfam DnaJ central domain 358 421 IPR001305 GO:0031072|GO:0051082
Alju06g1924 575 SMART dnaj_3 217 274 IPR001623 -
Alju06g1924 575 ProSiteProfiles dnaJ domain profile. 218 282 IPR001623 -
Alju06g1924 575 FunFam Molecular chaperone DnaJ 350 426 - -
Alju06g1924 575 Hamap Chaperone protein DnaJ [dnaJ]. 215 571 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Alju06g1924 575 ProSiteProfiles Zinc finger CR-type profile. 345 426 IPR001305 GO:0031072|GO:0051082
Alju06g1924 575 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 168 571 - -
Alju06g1924 575 Gene3D - 328 463 - -
Alju06g1924 575 SUPERFAMILY HSP40/DnaJ peptide-binding domain 473 559 IPR008971 GO:0006457|GO:0051082
Alju06g1924 575 Gene3D - 358 421 - -
Alju06g1924 575 Gene3D - 468 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1924 Alju-ChrAlju06 43661083 43668760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1924 219 281 C2H2 Transcription Factor Family AT1G74250 44.928 1.13e-09 59.3