Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1918 ATGGAGGAGGAAGAGCATGAGGTGTACGGAGGCGATATCCCAGACATGGGCGAGATGGAAGGAGATTTGGATTCGCACCATGCCGATGTCGATATGTCTGCTGCCGATGATGATGCCGTCAAGGAGCTTGATGAGATGAAGAAGAGATTGAAGGAAATGGAAGAGGAAGCAGCAGCTCTTCGTGAAATGCAAGCCAAGGTTGAGAAGGAGATGGGTGCGGTTCAAGATCCTGCGAGTGCAGCTGCTTCTCAGGCAAGCAAAGAGGAGGCAGATTCTCGATCTGTTTTTGTTGGCAATGTTGATTATGCATGCACGCCTGAAGAAGTGCAGCAACACTTCCAATCATGTGGGACAGTGAATAGGGTGACTATCCTTACAGACAAGTTTGGTCATCCGAAAGGTTTTGCCTATGTGGAATTCCTTGAACCTGAAGCTGTTCAAGAGGCTGTTGCCTTGAATGAATCTGAACTGCATGGTCGTCAATTGAAGGTTATGGCAAAGAGGACCAATGTCCCTGGAATGAAACAGTATCGTCCCAGGCGTTTCAATCCTTACATGGGGTATCGCTTCCGGAGGCCATTCCCTCCCCCTTACTTTTACTCTCCTTATGGATATGGGAAGGTTCCCAGGGTCAGAAGGCCAAGTCGGTACATGCCATATTATTAG 666 0.485 MEEEEHEVYGGDIPDMGEMEGDLDSHHADVDMSAADDDAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPASAAASQASKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEPEAVQEAVALNESELHGRQLKVMAKRTNVPGMKQYRPRRFNPYMGYRFRRPFPPPYFYSPYGYGKVPRVRRPSRYMPYY 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1918 221 MobiDBLite consensus disorder prediction 69 90 - -
Alju06g1918 221 SUPERFAMILY RNA-binding domain, RBD 83 191 IPR035979 GO:0003676
Alju06g1918 221 Coils Coil 36 70 - -
Alju06g1918 221 Gene3D - 29 165 IPR012677 -
Alju06g1918 221 FunFam Polyadenylate-binding protein 1 32 165 - -
Alju06g1918 221 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 93 169 IPR000504 GO:0003723
Alju06g1918 221 SMART rrm1_1 94 165 IPR000504 GO:0003723
Alju06g1918 221 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 95 163 IPR000504 GO:0003723
Alju06g1918 221 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 24 177 - -
Alju06g1918 221 CDD RRM_II_PABPs 94 164 - -
Alju06g1918 221 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1918 Alju-ChrAlju06 43520042 43524093 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1918 90 164 Eukaryotic Initiation Factors Gene Family AT2G36660 36.842 1.16e-10 58.9