Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1901 ATGGCTTGTGGAAGAAAATGCAGCCCAATTCCTTCCCCTCTTCAATCGCCGGAGTCGCTTCCGATGCCCGCCGCTTGGCCAATTATCTCCTCCGGCGTTGGCCACGGCGTTGATCAAATATATGTTCTTCGAGTTGTGATGACCGCTCTAGCTTCCATAATTTCTCTGCTTCTCCTTCTCTTCGTTGTGCTAAAATTTTTAGGAAGATACTACTTCTCGAGGAGATATTACAACAATAGGAGAATCAACTCACCGATTTTGTTTGATATTCGCGGCGACTCTGGGTTCTCCGATGACGACGATGGACCACCAATTATGCATCCGATCTGGTTCATCAACACCGTCGGTCTCCAGCAATCCGTTATCGATTCAATCGCAATTTTCAAATACAGAAAAGACGATGGGTTAATTGAAGGAACGGAATGTTCTGTGTGTTTAGGTGAATTTCAAGAAGACGATAGCCTCCGAATCTTACCTAAATGCACCCACGCTTTTCACGTTCAATGCATCGATACTTGGCTGAGATCGCGGAAGAATTGCCCTTTGTGTCGAGCTCCGATTGTTCGTGAAACTTCCGGGAGAGAGGTAACTGCCGTGACGGTGCCTGAACCTGAGGTCGTCGGCGAGATCCGTGTGGAGAACTTGGCTGGTAGTGGTAGGGTTGATAGTTCTCAGGTTGGAGAAGGAGAGAGTAGTCAATCGAGGGTTGAAGATGACGATGATTCTGGGATTGTGGCTATTGAAGATGAAGCAGATGGTGAAGTTTCAGACAAGAATTTGGGAAATTGTGAGAAGATGAATAGAGTGAGGAGATCAGTTTCAGTTCATTCTTATCCTTCTTCTACATTTGAGGCACCAACTCAGGAGCTGAATTCGTATTCTCTACACTCCTTTTAG 897 0.4604 MACGRKCSPIPSPLQSPESLPMPAAWPIISSGVGHGVDQIYVLRVVMTALASIISLLLLLFVVLKFLGRYYFSRRYYNNRRINSPILFDIRGDSGFSDDDDGPPIMHPIWFINTVGLQQSVIDSIAIFKYRKDDGLIEGTECSVCLGEFQEDDSLRILPKCTHAFHVQCIDTWLRSRKNCPLCRAPIVRETSGREVTAVTVPEPEVVGEIRVENLAGSGRVDSSQVGEGESSQSRVEDDDDSGIVAIEDEADGEVSDKNLGNCEKMNRVRRSVSVHSYPSSTFEAPTQELNSYSLHSF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1901 298 MobiDBLite consensus disorder prediction 275 298 - -
Alju06g1901 298 CDD RING-H2_EL5-like 141 184 - -
Alju06g1901 298 ProSiteProfiles Zinc finger RING-type profile. 142 184 IPR001841 -
Alju06g1901 298 Pfam Ring finger domain 141 184 IPR001841 -
Alju06g1901 298 MobiDBLite consensus disorder prediction 218 242 - -
Alju06g1901 298 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 116 192 IPR013083 -
Alju06g1901 298 SUPERFAMILY RING/U-box 128 192 - -
Alju06g1901 298 SMART FANCL_C_2 138 191 - -
Alju06g1901 298 SMART ring_2 142 183 IPR001841 -
Alju06g1901 298 FunFam RING-H2 finger protein ATL54 117 190 - -
Alju06g1901 298 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 50 190 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1901 Alju-ChrAlju06 42964211 42965107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1901 99 236 C3H Transcription Factor Family AT4G33565 49.324 7.31e-41 144