Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1895 ATGGGTCTCTCTAATATCCCTAATTTAGCTGAAGGGGTACTTCCTGTTCTCTTGGTGAACACAGTTCTATCAGTAGTTCTGCTCAAGAACATGCTGAGATCTGTGCTGGAAGCCGTCGGCGTGACATCGTCCTCGTCGTCATCTTCATCATATTCTCAGAACACAGAGGAAGATACAGATGATGAAACAGAGAGAGAAAGTTGGAGAAGAAGGAGGGTGTCAATAACACAGTACAAGGTGTGTCGAAGAGAAGAAAAGACGACGACGACGACACCGACAACAAGTGACTCTGGCTCGAGTGTTGGATTGGGTACGGTGGAGTGTTGCGTATGTCTGTGTGGGTTCGAAGCGAATCAGGAGGTGAGTGAATTGCCCTGTAAACATTTATTCCACAGAGGTTGTTTGGACAAGTGGTTCGATAACAAACACTTAACCTGTCCTCTGTGTCGTTCCATTGATTGA 462 0.461 MGLSNIPNLAEGVLPVLLVNTVLSVVLLKNMLRSVLEAVGVTSSSSSSSSYSQNTEEDTDDETERESWRRRRVSITQYKVCRREEKTTTTTPTTSDSGSSVGLGTVECCVCLCGFEANQEVSELPCKHLFHRGCLDKWFDNKHLTCPLCRSID 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1895 153 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Alju06g1895 153 Pfam Ring finger domain 107 150 IPR001841 -
Alju06g1895 153 SUPERFAMILY RING/U-box 107 151 - -
Alju06g1895 153 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 152 IPR013083 -
Alju06g1895 153 PANTHER - 1 151 IPR044249 -
Alju06g1895 153 SMART ring_2 108 149 IPR001841 -
Alju06g1895 153 SMART ringv_2 107 150 IPR011016 GO:0008270
Alju06g1895 153 MobiDBLite consensus disorder prediction 43 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1895 Alju-ChrAlju06 42780475 42780936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1895 1 151 C3H Transcription Factor Family AT2G04240 34.969 3.99e-23 87.8