Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g1863 ATGATGAACTCCTTCAAGACCATTGATGGTAGAGGAGCCAATGTTCACATTGGAGGTGGTCCTTGCATCACAATATGCCAACATGGATACTTCTATGTGGTGAACAATGATTATACTCATTGGAGGATGTATGCGATAGGAGGAAGTGCTAATCCAACAATAAACAGTCAAGGAAACAGATTTCTTACTCCAAACGATAGTACCTTGAAAGAGGTGACCAAGAGGGAGGACACAACTGAGAGCGTATGGAAGATATGGAATTGGAGATCTTCAGGAGATCTGATATTAAACGGTGCATTTTTTACACCGTCGGGGAAGGGATCATCTTCGAGCTATGCTCGAGCTTTGAGTATGTCTGCAAAATCTTCTTCACTGGTTAGTTCTTTAACAGCAGCTGCTAGAATACTAAACTGCACAAAGGGATGTCGTTGCTGA 435 0.423 MMNSFKTIDGRGANVHIGGGPCITICQHGYFYVVNNDYTHWRMYAIGGSANPTINSQGNRFLTPNDSTLKEVTKREDTTESVWKIWNWRSSGDLILNGAFFTPSGKGSSSSYARALSMSAKSSSLVSSLTAAARILNCTKGCRC 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g1863 144 PANTHER PECTATE LYASE 18-RELATED 1 26 IPR045032 GO:0030570
Alju06g1863 144 PRINTS Pollen allergen Amb family signature 44 63 IPR018082 -
Alju06g1863 144 PRINTS Pollen allergen Amb family signature 22 41 IPR018082 -
Alju06g1863 144 PRINTS Pollen allergen Amb family signature 86 110 IPR018082 -
Alju06g1863 144 PRINTS Pollen allergen Amb family signature 115 138 IPR018082 -
Alju06g1863 144 Gene3D - 25 137 IPR012334 -
Alju06g1863 144 SUPERFAMILY Pectin lyase-like 25 136 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g1863 Alju-ChrAlju06 40883495 40884477 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g1863 1 25 Polysaccharide Lyase AT4G24780 88.000 1.20e-08 50.4